73fb98b0b9d0cae9bcb0568332680247 *DESCRIPTION
28e9f48dc04920118e7be8758051d958 *INDEX
b1c51e9523ecfd5ad8abb9127cef61be *Meta/Rd.rds
043cdfa0d1beb9ee49f1a7b9884bf8e7 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
33884443a0eb1a304dde9d4add3fba17 *Meta/hsearch.rds
52bdc3f30ea0587e092524fb1a3372f1 *Meta/links.rds
07bec6f97bac7f6641d79bdf27529fc2 *Meta/nsInfo.rds
9a3cd921fd2b045ac7024d3e65373b43 *Meta/package.rds
252eac4839df7bcddb493cf6992f383b *Meta/vignette.rds
08a4900109d99333b989aaae066a4053 *NAMESPACE
bd46b4b5dd6266a36a545257ef08babd *NEWS.Rd
ebf0fc819595d631b8bf280c4b049940 *R/SeqVarTools
ea80be8213e67386e90e76c6ff4c35c2 *R/SeqVarTools.rdb
bdd761908cdb2137b3986be00ee0561d *R/SeqVarTools.rdx
b05eacb5bb0ac003db2d0e940d3a72ab *data/Rdata.rdb
08a56136d28dd90a1fa820831f9387d8 *data/Rdata.rds
de8cb30e148642100b8c43a680d14000 *data/Rdata.rdx
76cb359117f2dc1f97d162eebd2f3b88 *doc/Iterators.R
1c40ee4fc5685195397ada480c7cc3a8 *doc/Iterators.Rnw
7295af6634ce250ca90d2a7b225b3b19 *doc/Iterators.pdf
c1fc447bb6c9d1d14285ea17bf770762 *doc/SeqVarTools.R
ba2b9fe2010cc3e4bc3c2edb9238aad3 *doc/SeqVarTools.Rnw
e34a215fa8217324ff57f9c44b11c577 *doc/SeqVarTools.pdf
c603ade6d58b73fc36bd55e06d4b62ee *doc/index.html
ae093c8db2c33620ef663e88e448e8ac *extdata/1KG_chrY.gds
fe53727d42944d3061179240a51f18a2 *extdata/gl_chr1.gds
277341ce20f406ab09a0c23c6bd0d86f *extdata/gl_chr1.vcf
0d876e7742442bff7ccc96fcebfbff27 *extdata/hapmap_annotation.txt
300d237092c8d847ebc6b107f28130fb *extdata/hapmap_annotation_DD.txt
9fd0c95a515e42d24d9623371a5789a9 *extdata/hapmap_exome_chr22.gds
1765acde4cea95c3dade1b28bea5fb97 *help/AnIndex
7be9c8c6e6a25ef94b77032d94551443 *help/SeqVarTools.rdb
5ef406f925d134388703646d8c91505d *help/SeqVarTools.rdx
0954d74832434fa476d27267dd2e08c7 *help/aliases.rds
7bf025456813fddf965b6ca57df0eef4 *help/paths.rds
de2a83891d4c10f6c5abf9a7a1482810 *html/00Index.html
f4cce0d880237e77c27970dd4d9823fb *html/Iterator-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
d03f05211af056a264f99f48994e6866 *html/SeqVarData-class.html
ef1881b36f92b280a0996e95eeb6c249 *html/SeqVarTools-package.html
1be5f870c3dcc066aa9975c25c6bdb2f *html/allele-methods.html
b51e84ee30b3039e25618620169ce930 *html/alleleFrequency.html
2cbafb22648c396f15942c997c8a5b02 *html/alternateAlleleDetection.html
369e97fd3a43c1470862750f9d530831 *html/applyMethod.html
18674cbabfeeee85f0b906b3eb534559 *html/chromWithPAR.html
59569463e457f7bb4f1cf1853ba7bdb9 *html/countSingletons.html
82bf98fb025e5235720d1d4ada1ee734 *html/duplicateDiscordance.html
06b648c9e4e630985b47c415eb3f7dc2 *html/getGenotype.html
abbcc0e53ac629fea73dd28b7295851c *html/getVariableLengthData.html
cab01fe18e9c1d9684ebcba77ec5bc29 *html/heterozygosity.html
4bb0c6e214a9800cca9ec93ef5df6d7b *html/hwe.html
a6ff6a93cb7097d8d09d0e4de0fd80c4 *html/imputedDosage.html
c469bf6a1fd74e3a6f32fb18cc6886d1 *html/inbreedCoeff.html
d400a0cf19b3ec806d89d5963f20d38f *html/isSNV.html
fb77c0934ec1a69a28878863030f6006 *html/isVariant.html
0f1878e2c2ff653d1dbb69c5d010cb92 *html/meanBySample.html
0ce09521aaca4e9e7b80e08063a59efc *html/mendelErr.html
052cb83bae6f97364d2624fec83a35c4 *html/missingGenotypeRate.html
1dea3ca7f32d10ca0ffbaeda4fce4280 *html/pca.html
3760b1cb22eaf46c336df503b881b34b *html/pedigree.html
eb21e880eb3a207257b1debb88685ebf *html/refFrac.html
9514199c9718d589b5c490b02610d37e *html/regression.html
c938240d043664c61e021c47b7be53ac *html/setVariantID.html
fa871fdf826cd8734fe58bc01a622b23 *html/titv.html
d98d49181a17336cdf132b49715e0e05 *html/variantInfo.html
4beba1d549b072b2b347ba95e2e09470 *unitTests/test_Iterator.R
4c925a5dde577bef97a0924e3263ed89 *unitTests/test_SeqVarData.R
6ee3bec8eadcf9900d7cdfbc461ec7a7 *unitTests/test_VariableLength.R
7697dc00c2ffbeddebf19a269eac6e39 *unitTests/test_alleleFrequency.R
122a142ddb16eedaf9cbe76775563b59 *unitTests/test_alleles.R
2428338d68b3b354eb13407aa5dac611 *unitTests/test_alternateAlleleDetection.R
9592ee40b115046a6df186ada350ee39 *unitTests/test_applyMethod.R
cd0460b81da068ec816ba397b1846ac3 *unitTests/test_countSingletons.R
09f97c76845f9ad59de688b899c5f2f0 *unitTests/test_dosage.R
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03b19e9a9bba728988239de9536d9b4f *unitTests/test_getData.R
367fcd063f12bb69ce1b246624f2b296 *unitTests/test_hethom.R
da760327a06e7759615705513b4ae3ba *unitTests/test_hwe.R
f317f78bdf641ff68a5c8e82610fe78c *unitTests/test_inbreedCoeff.R
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18b7fbcf1b0abbf3c389427c38bb4fab *unitTests/test_missingGenotypeRate.R
6fbda97911537143c5d87425b92e8e5d *unitTests/test_pca.R
5f71f17f30ce922e7f272d473aecc609 *unitTests/test_refFrac.R
e590df157169b1a2aa18e511a99cd6bb *unitTests/test_regression.R
cfc96835525fc9946ab8a8421ea10409 *unitTests/test_setVariantID.R
48e3df184947d57153b3486a001c155f *unitTests/test_sparse.R
2bb7113efc3a50fb089284efbdcb9802 *unitTests/test_titv.R
6c5235d30c5b90224dc1ed49869d63a3 *unitTests/test_utils.R
