36e91577cd8dec0b18cd91e0f7ec085e *DESCRIPTION
5914d7f5dcce9b36f452e980ae11f324 *INDEX
324fddd72108c2431f52aab53e29427c *Meta/Rd.rds
d675fd20c97a2aeb7ed7b102f326a366 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
27711f71781bd0e522cdf30b08fb5d51 *Meta/hsearch.rds
c8208a7a907d927a9f176581b320f1e4 *Meta/links.rds
93dbbc6b19b77584b46886bbb81e009c *Meta/nsInfo.rds
7e759c36525e52b6a34e16112e006e8e *Meta/package.rds
e711e0d3a04a28169019f77021abdfff *Meta/vignette.rds
540677ce775da22abb0f5b4b7468bf5b *NAMESPACE
95d8c304a020aef8380b4ee08521e48c *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/SCOPE
1c0eceba0b386f7354b7ad372c6ff729 *R/SCOPE.rdb
8d89ed6b9c46ff035b9f7faa83f65c3a *R/SCOPE.rdx
534588930df47ce70271f6319464bdd0 *data/Rdata.rdb
47622626f10e6c6664643a9605943618 *data/Rdata.rds
1c336dd7d3c235a536dadeeba0296084 *data/Rdata.rdx
896ee5cf11492ae4b0d65f855072ce63 *doc/SCOPE_vignette.R
2b99cb210da6f381e4adf2321300a186 *doc/SCOPE_vignette.Rmd
7219646c001874e3528d6c9c9ec15376 *doc/SCOPE_vignette.html
880f6311627079f047ed9824ef50baa8 *doc/index.html
1e9c0988e992371032f30ee5ca2dbce3 *docs/split_script.py
c12183e4c7b3cfa9f504cb21e463adae *help/AnIndex
a42daee86e79544878b3107ceb3df6f9 *help/SCOPE.rdb
e1cbd5724fdd4acb8e06c776665c201f *help/SCOPE.rdx
eafcd55e9175459accca74e8e489190f *help/aliases.rds
4141801a60cf1bb18bf87b094faa6941 *help/paths.rds
817291ff595cd7beba88704545f73632 *html/00Index.html
3649935a9c2e18362e50762d269260c8 *html/QCmetric.scopeDemo.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
feef1097438a1d01578f4c8be768846a *html/Y_sim.html
3587eff877e5bc9c79b40958dd57866d *html/coverageObj.scopeDemo.html
881bf4e9d89a4423c5485b5bcc5f9129 *html/get_bam_bed.html
f3bffbb378d7b33e947f376d93b7b75c *html/get_coverage_scDNA.html
3abf8f6fdf86f95bc8d0d9d72d42b54e *html/get_gc.html
62405974b8e7de9633977c5e23ad8d50 *html/get_gini.html
751be29ecdae8a0a78ae40ca6b7a189a *html/get_mapp.html
ecd61636387699c8dbce62cfefd81d35 *html/get_samp_QC.html
440a4ebef90b1569f4398f9e1683618e *html/iCN_sim.html
13f5adc79a76cd57a23c2e53e36c2647 *html/initialize_ploidy.html
1e05e4dea157152d2b542d6e50bcc9b0 *html/initialize_ploidy_group.html
577bc724d2b2f6769b94781825a27700 *html/normObj.scopeDemo.html
c23055d330d0ec73df5d12fa0e096475 *html/normalize_codex2_ns_noK.html
9bb8cf5331b924e9fdfa76baa41ec3e5 *html/normalize_scope.html
f6fbca68c7e71211e0b973d4bc628f57 *html/normalize_scope_foreach.html
36a030f0e28cda8020aa3e4295182700 *html/normalize_scope_group.html
cd2227211c2a9c3224716bddc315209c *html/perform_qc.html
4db44454ef63a60cb062681c4018da0b *html/plot_EM_fit.html
6efd33a1051cda41a8978747206b3d21 *html/plot_iCN.html
7c9d75e8672414dc4c6b3ad235ed1eb1 *html/ref.scopeDemo.html
bece070ca104ba1e3584dfe8e80d7b38 *html/ref_sim.html
02546d30054e71f274ec52c29c07a248 *html/segment_CBScs.html
