CopyEstimate {Repitools} | R Documentation

## Container for results of fold change copy number estimation.

### Description

Contains the genomic coordinates of regions, and fold change estimates.

### Constructor

  `CopyEstimate(windows, unadj.CN, unadj.CN.seg)` Creates a CopyEstimate object.

  `windows`

    A `GRanges` object.

  `unadj.CN`

    A matrix of fold changes.

  `unadj.CN.seg`

    A `GRangesList` object holding the segmentation results.

### Additional Slots

These are added to by `absoluteCN` or `relativeCN`

type

  A flag that contains if the copy number data is absolute or relative.

[Package Repitools version 1.33.3 Index]