Unknown-Genotype.fna {QSutils} | R Documentation

## Fasta file with reads of unknown genotype

### Description

Fasta file with hepatitis B virus sequences of unknown genotype. This is used to illustrate the genotyping of HBV sequences with the `QSutils` package.

### Format

Fasta file format. Each sequence starts with the symbol ">" followed by the sequence ID. Subsequent lines correspond to the nucleotide sequences or peptide sequences.

### See Also

`DBrule`

### Examples

    filepath<-system.file("extdata","Unknown-Genotype.fna", package="QSutils")
    lst2Geno <- ReadAmplSeqs(filepath,type="DNA")
    hseq <- lst2Geno$hseq[1]
    hseq

[Package QSutils version 1.5.0 Index]