4a531de76f0b617c42ca9af72d11a0c9 *DESCRIPTION
7298bf1998ef080a6486f0ce07699584 *INDEX
2ee836ddea5ffac80d0d0731c750c03f *Meta/Rd.rds
15590e6e24ef6a9fe996a0048b03d5ae *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
2871a027b69b16026c81a917c54d63f1 *Meta/hsearch.rds
0f725d613f8e76458f54fb2d1911cf76 *Meta/links.rds
371c0c508aac519d1b46fb0cd7c5243b *Meta/nsInfo.rds
c252f268c469fbd8d966f4261c353779 *Meta/package.rds
c589f12cd670bfd10671bf0033061bfb *Meta/vignette.rds
d1fbaa5ec611772003cdd008fa92a82b *NAMESPACE
0401dc9469fa7a8dc46d4e595d817cfc *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/PathoStat
962c9dface2a95a48398278a4e375152 *R/PathoStat.rdb
9b019b1d8e7c988ecf2433eae6aa224f *R/PathoStat.rdx
114d54e784880d31111784869c8dcfe4 *data/asthma_pstat_data.rda
30c80b9013edf020846584f73f5868b1 *data/pstat_data.rda
fe1a484fcdd52cdab201874764a4fd67 *data/pstat_data_2_L1.rda
0b5e4e0d9b9c78b7b6b38bb9cac98162 *data/pstat_data_2_L2.rda
079dfd085449a525103f99528727bd42 *doc/PathoStat-vignette.R
90819198d60b1122458e63b0f33c6416 *doc/PathoStat-vignette.Rmd
0f919467943ec10184de504cfea87cb3 *doc/PathoStat-vignette.html
55fa9bf4a798516988b667e51afdecb4 *doc/index.html
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5cf53a7bc65524f57d114217a9dc1865 *example/data/Sample_01_2-sam-report.tsv
41d8d6966447dfb1ec11b7e18c14bc80 *example/data/Sample_01_3-sam-report.tsv
ff5da6f140870979875ac96782e79139 *example/data/Sample_02_1-sam-report.tsv
c390d4dca9122ba210a6c96382c34646 *example/data/Sample_02_2-sam-report.tsv
7f20258f9971477e77a8fb3f04d8d8c9 *example/data/Sample_02_3-sam-report.tsv
a98a2ac6574cad5d9b7b92be786758a1 *example/data/count_example/annotation_example.csv
48d6c45a85044c95e0df631512c8d0cc *example/data/count_example/count_example.csv
a8e08297eb9e5c0c5d96387fe7126990 *example/data/count_example/taxonomy_table.csv
d32268fb68efe58e7558c83522412f6e *example/data/pathoscope_example/Sample_01_1-sam-report.tsv
5cf53a7bc65524f57d114217a9dc1865 *example/data/pathoscope_example/Sample_01_2-sam-report.tsv
41d8d6966447dfb1ec11b7e18c14bc80 *example/data/pathoscope_example/Sample_01_3-sam-report.tsv
ff5da6f140870979875ac96782e79139 *example/data/pathoscope_example/Sample_02_1-sam-report.tsv
c390d4dca9122ba210a6c96382c34646 *example/data/pathoscope_example/Sample_02_2-sam-report.tsv
7f20258f9971477e77a8fb3f04d8d8c9 *example/data/pathoscope_example/Sample_02_3-sam-report.tsv
37d5372f780a48dab71cb555e7f2adf2 *example/data/pathoscope_example/sample_data.tsv
682edb42f51e470ca1a1f28166df91a2 *example/data/sample_data.tsv
ebbc52ff4428fcaaff87dc46303b1e02 *example/pathostat_pipeline.R
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372cccdc38a7e9264947f6865ae028b0 *help/PathoStat.rdx
46305baaff9345a917dcfc79c2c622f5 *help/aliases.rds
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af37759a0743600cb723cc60b9ec8ca6 *html/Chisq_Test_Pam.html
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68ad4854de740b62337aefd10b26379c *html/GET_PAM.html
4197308fa2c4f62d970eb6bc43f38b2b *html/LOOAUC_simple_multiple_noplot_one_df.html
df2c967845046aca7abd6421abcbe7d9 *html/LOOAUC_simple_multiple_one_df.html
4e1de5b255da0750f9c3681598af6d2a *html/PathoStat-class.html
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ee965a26a78163c15ac8677b7065719e *html/TranslateIdToTaxLevel.html
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0f918d53c76068fdb0f95233cf550051 *html/findTaxonomy.html
3f0b11dad3d0375dba436e882ece51a8 *html/findTaxonomy300.html
10807a74df9dbd5fab66935a4c94fa2b *html/formatTaxTable.html
08594add3d9bc32484bb307ab4286dd0 *html/getShinyInput.html
1879b0743caa6ab93bc63b059eefec68 *html/getShinyInputCombat.html
3bb9c0533b88d5d22bf2ab8c53253805 *html/getShinyInputOrig.html
5d34fce7c623e14d7162ed40d2d71455 *html/getSignatureFromMultipleGlmnet.html
ec7ab02fb801fbce47735b864f359cf0 *html/grepTid.html
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0c7ca3add79f108eae678c1be1a88d7a *html/loadPstat.html
15f810aad0ece9cf6a38f4dd1e929474 *html/log2CPM.html
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7bb34652165d19ab5fb5248d31af45f2 *html/setShinyInput.html
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40717d27107904acbb2bd528bb85d5c7 *html/summarizeTable.html
b2fe1d9686b3305f28fd5c868e0b8f2f *shiny/PathoStat/app.R
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8bb33532ed03c49f4b5b091402974228 *shiny/PathoStat/server/server_06_differential.R
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9fb546151ee067d29bd5ab9e9b11a44d *shiny/PathoStat/ui/ui_07_biomarker.R
4f15876e761b3a43e9e285b39633b731 *shiny/PathoStat/utils/helpers.R
033c64374aea6d78166301adafc154cd *shiny/PathoStat/utils/old_server_stuff.R
c35638cc8407632731c558ac34a1e28f *shiny/PathoStat/utils/old_ui_stuff.R
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