TCGA_Load_MolecularData {MethylMix} | R Documentation

## The TCGA_Load_MolecularData function

### Description

Internal. Reads in gene expressiondata. Deletes samples and genes with more NAs than the respective thresholds. Imputes other NAs values.

### Usage

    TCGA_Load_MolecularData(Filename, MissingValueThresholdGene = 0.3,
      MissingValueThresholdSample = 0.1)

### Arguments

`Filename` | name of the file with the data.
`MissingValueThresholdGene` | threshold for missing values per gene. Genes with a percentage of NAs greater than this threshold are removed. Default is 0.3.
`MissingValueThresholdSample` | threshold for missing values per sample. Samples with a percentage of NAs greater than this threshold are removed. Default is 0.1.

### Value

gene expression data.

[Package MethylMix version 2.17.0 Index]