sensanal {GGtools} | R Documentation

## Summarize information from a collection of eQTL searches for sensitivity assessment

### Description

Summarize information from a collection of eQTL searches for sensitivity assessment

### Usage

    sensanal(object, fdrbound)

### Arguments

`object` | instance of `sensiCisInput-class`
`fdrbound` | numeric upper bound on FDR for declarations of eQTL yield

### Details

Sensitivity analysis for cis-eQTL search involves checking effects of scope of search, allele frequency filtering, and adjustment for expression heterogeneity on eQTL declarations. In this version, we focus on collections of outputs of `best.cis.eQTLs`, to which the values of tuning parameters are bound. These collections are identified in a `sensiCisInput-class` instance, and the `sensanal` function processes these outputs into a `sensiCisOutput-class` instance for tabulation and visualization.

### Value

a `sensiCisOutput-class` instance

### Author(s)

VJ Carey <stvjc@channing.harvard.edu>

[Package GGtools version 5.23.2 Index]