GetClusters {FlowSOM} | R Documentation

## Get cluster label for all individual cells

### Description

Get cluster label for all individual cells

### Usage

    GetClusters(fsom)

### Arguments

`fsom` | FlowSOM object as generated by the FlowSOM function or the BuildSOM function

### Value

vector label for every cell

### Examples

    fileName <- system.file("extdata", "68983.fcs", package="FlowSOM")
    flowSOM.res <- FlowSOM(fileName, compensate=TRUE,transform=TRUE,
                          scale=TRUE,colsToUse=c(9,12,14:18),nClus=10)
    cluster_labels <- GetClusters(flowSOM.res)
    cluster_labels <- GetClusters(flowSOM.res$FlowSOM)

[Package FlowSOM version 1.19.4 Index]