NormiR.methods {ExiMiR} | R Documentation

## ExiMiR functions for enumerating the names of low-level normalization methods or arguments

### Description

These functions enumerate the names of methods or arguments of the low-level functions for miRNA raw data normalization (i.e. background correction, (spike-in probe-based) normalization, PM corrrection, summarization). They take into account how the input `AffyBatch` object was created as well as the underlying array type.

### Usage

    NormiR.bgcorrect.methods(object)
    NormiR.normalize.methods(object)
    NormiR.pmcorrect.methods(object)
    NormiR.summary.methods()
    NormiR.spikein.args()

### Arguments

`object` | An `AffyBatch` object.

### Details

See accompanying vignette.

### Value

List of strings containing the names of the methods or arguments available for the input `AffyBatch` object.

### Author(s)

Sylvain.Gubian, Alain.Sewer, PMP SA

### See Also

`NormiR`, `bg.correct.miR`, `norm.miR`, `summarize.miR`.

[Package ExiMiR version 2.29.1 Index]