getTFBindingSites {ELMER} | R Documentation

## Get MR TF binding regions infered by ELMER

### Description

Saves a bed file with the unmethylated probes (+-250bp) regions that was infered to be bound by a given TF

### Usage

    getTFBindingSites(
      tf = NULL,
      results.dir = NULL,
      genome = "hg38",
      met.platform = "450K"
    )

### Arguments

`tf` | TF name
`results.dir` | path to the directory with the results (i.e. analysis/unsupervised/definition-Primary.solid.Tumor_vs_Solid.Tissue.Normal/hypo/)
`genome` | Human genome (hg38, hg19)
`met.platform` | DNA Methylation Array platform (EPIC, 450K)

### Examples

    ## Not run:
      getTFBindingSites("HNF1A",
                        results.dir = "analysis/unsupervised/group-Tumor_vs_Normal/hypo/")

    ## End(Not run)

[Package ELMER version 2.11.1 Index]