RankNorm {EBSeq} | R Documentation

## Rank Normalization

### Description

'RankNorm' gives the rank normalization.

### Usage

    RankNorm(Data)

### Arguments

`Data` | The data matrix with transcripts in rows and lanes in columns.

### Value

The function will return a matrix contains the normalization factor for each lane and each transcript.

### Author(s)

Ning Leng

### See Also

MedianNorm, QuantileNorm

### Examples

    data(GeneMat)
    Sizes = RankNorm(GeneMat)
    # Run EBSeq
    # EBres = EBTest(Data = GeneData, NgVector = rep(1,10^4),
    #	Vect5End = rep(1,10^4), Vect3End = rep(1,10^4),
    #	Conditions = as.factor(rep(c(1,2), each=5)),
    #	sizeFactors = Sizes, maxround=5)

[Package EBSeq version 1.27.0 Index]