rmse {DeconRNASeq} | R Documentation

## Calculate the differences between proportions predicted by deconvolution and the values actually measured

### Description

A function is used to calculate the root-mean-square error (RMSE) for the accurracy of estimated proportions.

### Usage

          rmse(x, y)

### Arguments

`x` | proportions from the actual measurement
`y` | estimated proportions from our deconvolution

### Value

A number for RMSE

### Author(s)

Ting Gong tinggong@gmail.com Joseph D. Szustakowski joseph.szustakowski@novartis.com

### References

Gong, T., et al. (2011) Optimal Deconvolution of Transcriptional Profiling Data Using Quadratic Programming with Application to Complex Clinical Blood Samples, PLoS One, 6, e27156.

[Package DeconRNASeq version 1.29.0 Index]