plotXICgroup {DIAlignR} | R Documentation

## Plot Extracted-ion chromatogram group.

### Description

Plot Extracted-ion chromatogram group.

### Usage

    plotXICgroup(XIC_group, peakAnnot = NULL, Title = NULL)

### Arguments

`XIC_group` | (list) It is a list of dataframe which has two columns. First column is for time and second column indicates intensity.
`peakAnnot` | (numeric) Peak-apex time.
`Title` | (logical) TRUE: name of the list will be displayed as title.

### Value

A plot to the current device.

### Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-13

### Examples

    dataPath <- system.file("extdata", package = "DIAlignR")
    runs <- c("hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt",
     "hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt")
    XICs <- getXICs(analytes = "QFNNTDIVLLEDFQK_3", runs = runs, dataPath = dataPath,
     XICfilter = "none")
    plotXICgroup(XICs[["hroest_K120809_Strep0%PlasmaBiolRepl2_R04_SW_filt"]][[1]])

    XICs <- getXICs(analytes = "14299_QFNNTDIVLLEDFQK/3", runs = runs, dataPath = dataPath,
           XICfilter = "sgolay", SgolayFiltOrd = 4, SgolayFiltLen = 13, analyteInGroupLabel = TRUE)
    plotXICgroup(XICs[["hroest_K120809_Strep10%PlasmaBiolRepl2_R04_SW_filt"]][[1]])

[Package DIAlignR version 0.99.12 Index]