getAnalytesName {DIAlignR} | R Documentation

## Get names of analytes found in all runs

### Description

This function provides all found analytes or only common analytes that have m-score less than analyteFDR.

### Usage

    getAnalytesName(oswFiles, analyteFDR = 1, commonAnalytes = TRUE)

### Arguments

`oswFiles` | (list of data-frames) it is output from getOswFiles function.
`analyteFDR` | (numeric) only analytes that have m-score less than this, will be included in the output.
`commonAnalytes` | (logical) TRUE: intersect across all runs, FASLE: union across all runs.

### Value

A vector of strings.

### Author(s)

Shubham Gupta, shubh.gupta@mail.utoronto.ca

ORCID: 0000-0003-3500-8152

License: (c) Author (2019) + GPL-3 Date: 2019-12-14

### See Also

`getOswFiles`

### Examples

    data("oswFiles_DIAlignR", package = "DIAlignR")
    ## Not run:
    getAnalytesName(oswFiles = oswFiles_DIAlignR, analyteFDR = 0.01, commonAnalytes = TRUE)

    ## End(Not run)

[Package DIAlignR version 0.99.12 Index]