scores {ChIPanalyser} | R Documentation

## Accessor Method for the `scores` slot in a `ChIPScore` object

### Description

Setter Method for the `scores` slot in a `ChIPScore` object

### Usage

    scores(object)

### Arguments

`object` | `object` is `ChIPScore` object

### Details

When using the `processingChIP`, this functions will return a name list of normalised ChIP scores at loci of interest. This functions enalbles you to extract those scores from the `ChIPScore object.`

### Value

Returns the value assigned to the `scores` slot in a `ChIPScore` object.

### Author(s)

Patrick C. N. Martin <p.martin@essex.ac.uk>

### References

Zabet NR, Adryan B (2015) Estimating binding properties of transcription factors from genome-wide binding profiles. Nucleic Acids Res., 43, 84–94.

### Examples

    # Loading data
    data(ChIPanalyserData)

    eveLocusChip<-processingChIP(eveLocusChip,eveLocus)
    str(scores(eveLocusChip))

[Package ChIPanalyser version 1.9.1 Index]