013e29db7b8f2f651f2d153c8314a17e *CITATION
55a120f18bb40a96096390dd357f102c *DESCRIPTION
ead108cdb3e6b98a580d72616656a12d *INDEX
ae1cb92c5d3e1bfe46baf66f30bb6fe4 *Meta/Rd.rds
1d5b17ba29c5c7662b18bbb0f862726b *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
d7168a589225844e36abe5ef8538036b *Meta/hsearch.rds
058aefd0cbdb6b28ddbac2b521c49aff *Meta/links.rds
9f3c23d3c3560d34751ac8563e8c9489 *Meta/nsInfo.rds
53e9f823347108092041ebe020161efa *Meta/package.rds
a38012d1ac735f21cfc54c176c7591d2 *Meta/vignette.rds
2ec3cc96db5f96a37ad08d576d570b45 *NAMESPACE
42d6a385046d47afa99c34f22156a2fb *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CellTrails
7bf480b7ee29f38865efa0e7cc83e03e *R/CellTrails.rdb
2646184ed343cea3dd03adda0c38e777 *R/CellTrails.rdx
2836aaebd10baef67d8b7c92ffe49694 *data/exSCE.rda
3faabf899551585c0e7be36cb44a121a *doc/index.html
b1de54ca23821e29fcfe11014d4a89e4 *doc/vignette.R
5034a0645b4835293eb9ea3f238ca5a4 *doc/vignette.Rmd
9bb011f74dcf71e949541343c69a88b3 *doc/vignette.pdf
237acfe6ed2b68fb20461e9cad365966 *exdata/bundle.graphml
410d25c55074bf766541d580f5e26bc1 *exdata/bundle.rds
eebf81955f5ef29cefe227b1322f0b85 *exdata/exSCE.graphml
19f3c5281ffc30827eca9741dbda08f2 *exdata/th2.rds
64d5fcdc198c10aa967591fb9d53b7a6 *help/AnIndex
687a9a5ba9dfea7a4065fa676739f8cc *help/CellTrails.rdb
46fbea5cb80447db80401b47782e6e0c *help/CellTrails.rdx
fd34f8dcf66e24a5aaf8634de3199411 *help/aliases.rds
179846e1a1da99f917c9b17c1040e3c4 *help/paths.rds
c82a171858e6faafd6fea435cc472ea8 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
59d72e680b5413c80d5be9b701af0de6 *html/addTrail.html
8461dc5d6f969e47e49d44bca7ef8b85 *html/connectStates.html
9ae5b011d16a6ef81fa567838c9a63b7 *html/contrastTrailExpr.html
c7a57325727710df6cbd76ec16e4d8d5 *html/embedSamples.html
405ff2fea6d26c2c4cb4e50410b30558 *html/enrichment.test.html
a9d68c3d4812766ed1e9414570d3d147 *html/exSCE.html
f0ad142f0853793c60ebf40ff33d952a *html/featureNames-SingleCellExperiment-method.html
b3e9b5c1259cd72069d5f3b51938b27b *html/filterTrajFeaturesByCOV.html
cd3c6f11481edc6549989acbaf789c17 *html/filterTrajFeaturesByDL.html
b75ec6cf3653b68527142f9dc4400dd7 *html/filterTrajFeaturesByFF.html
6a5376281e66517545a6884c69865a4f *html/findSpectrum.html
7dbe143cbd6b0fc432219c502e3307cf *html/findStates.html
6ea6a1099642573ce4b91a6541f091cf *html/fitDynamic.html
b93ad13f23bf1744c20cf41d55584a4f *html/fitTrajectory.html
537253e01988efebfe615278114b0c69 *html/landmarks.html
df5735d35588d67d9a51705db1652e0c *html/latentSpace-set.html
5b5773eca40e570a27f4c928d10d96e7 *html/latentSpace.html
8ae7539989ad2888c01c1ff028a2e7ac *html/manifold2D-set.html
a04a4cc6c4114623cd57d19ab0cdae27 *html/manifold2D.html
b122b138b7fa6e7aa88844585a4823bb *html/pca.html
1ba511d77db0e85cad820fe5253352c4 *html/phenoNames.html
9e6796d8ec1c198c57933f5514c11130 *html/plotDynamic.html
728f8670a95aedad2d3d0535e81fd631 *html/plotManifold.html
1108b9673d0c7f1ab6752f0123205c7b *html/plotMap.html
b7e2689425e9add3e45d8f2f12f9fa5c *html/plotStateExpression.html
c1f5eacfd97e2fe0f927b9c51227244b *html/plotStateSize.html
5a277f222c53732152441a2176a8f6f8 *html/plotStateTrajectory.html
842614bddd44d3f0b967583f80c3478c *html/plotTrail.html
0449ab3c965b98029489cdc41cce802c *html/plotTrajectoryFit.html
0df9b3b303e1b12ce40a78bb75882173 *html/read.ygraphml.html
2a909405e510abcc67388c8e2e0ad3a3 *html/removeTrail.html
d7a95f8861b129c8ec98d297fa7a7584 *html/sampleNames-SingleCellExperiment-method.html
54f157b67863ea6790a368c4b1460cdd *html/selectTrajectory.html
feedf7b31d7fa0df9d2b4b03705bff14 *html/showTrajInfo.html
5a024d7e4fd337609e63ea8306c27a04 *html/simulate_exprs.html
813255021afe06638a039dbeb3fd3149 *html/stateTrajLayout-set.html
d49d25fbb8eee61b28a8b57382146d1a *html/states-set.html
5c4cfd32f9b465d355408760d22666fb *html/states.html
b953ee62f9e3961315c1a8138d87a47f *html/trailNames-set.html
503ea3656f6107e92ad78594f6daf6c6 *html/trailNames.html
7821491b5345aaa498f9ca2a6e745e10 *html/trails.html
631da1e070c1412a5a44f63119ee2d2a *html/trajComponents.html
297d49b2f26634f139854f21eeced8f2 *html/trajFeatureNames-set.html
5f7854d7eb20073ab56543ec5015584a *html/trajFeatureNames.html
d24c2c60c2ff80bb400b46888d991705 *html/trajLayout-set.html
84009123cdb38d972d1da8a4b97fba10 *html/trajLayout.html
10475fc5322a58bec97748b6b79cac7e *html/trajResiduals.html
2a1ab46dc7312039f9b16c6ad881f14b *html/trajSampleNames.html
def7356bd924c4c10099dc4ab7d7558e *html/userLandmarks-set.html
2b3033e5692acf0ac46897a8cc884546 *html/userLandmarks.html
1471e28ded3741c3840af70d43a3e6fd *html/write.ygraphml.html
2ca4999b950fe68d7395743ab796391d *scripts/make-data.R
adc1ef1ccc95f776a02fb10ae3eded15 *unitTests/test_addTrail.R
172ff435c36ae74abe46a4e8e1c5849b *unitTests/test_connectStates.R
4a624243fc8505c00a154190097cfd61 *unitTests/test_embedSamples.R
5ea251a23dd9db5dbb4518ba170cdd5f *unitTests/test_findSpectrum.R
4787f20a747b91fdbc1f3a8471d61dd7 *unitTests/test_findStates.R
188e4bdaa0a7ff46a8d5a54f0bb1373c *unitTests/test_fitDynamic.R
339907a9da89cb8b2fa28f2da75dfb3b *unitTests/test_fitTrajectory.R
60268a30a40c20cabbbdcebf954d5331 *unitTests/test_phenoNames.R
68056140f9f53837ce04450dc586347b *unitTests/test_plotDynamic.R
4eddcc292e90b99daf688ad223af818b *unitTests/test_plotManifold.R
1fe997bf1c6b9b5d66c0d6e311ca6236 *unitTests/test_plotMap.R
81a69b47d127e1a676e9d414cae7ac1d *unitTests/test_plotStateExpression.R
6254311d3afa8a6b6610f3c7f84150f3 *unitTests/test_plotStateSize.R
5d90e92b6df9af1c367a3f38955f1e0d *unitTests/test_plotStateTrajectory.R
248bcfa4e7f93aa84963c5f055957960 *unitTests/test_plotTrail.R
65b0f836fe1150ec1e9d7a5af0347361 *unitTests/test_plotTrajectoryFit.R
d662d1a8362f4f8ba7133be59c7e12ed *unitTests/test_userLandmarks.R
8480fc23f20afc4812da1cc60ff8c317 *unitTests/test_workflow_logic.R
