BackRatesMB {CancerMutationAnalysis} | R Documentation

## Data from the Parsons et al. 2011 study: Background mutation rates

### Description

Background rates for somatic mutations used in the Parsons et al. 2011 medulloblastoma (MB) study.

### Usage

    data(ParsonsMB11)

### Format

The background rates for somatic mutations used in the Parsons et al. MB study, broken down by mutation type. The object is a data frame which has a single row, with the variables representing the 25 different mutation types.

### References

Parsons DW, Li M, Zhang X, Jones S, Leary RJ, Lin J, Boca SM, Carter H, Samayoa J, Bettegowda C, et al. The genetic landscape of the childhood cancer medulloblastoma. Science. DOI: 10.1126/science.1198056

Parmigiani G, Lin J, Boca S, Sjoeblom T, Kinzler KW, Velculescu VE, Vogelstein B. Statistical methods for the analysis of cancer genome sequencing data. http://www.bepress.com/jhubiostat/paper126/

### See Also

`cma.scores`, `cma.fdr`, `cma.set.stat`, `cma.set.sim`, `SimMethodsSims-class`, `GeneCovMB`, `GeneSampMB`, `GeneAlterMB`

[Package CancerMutationAnalysis version 1.29.0 Index]