05e71d0969f838fc67c720e424a12496 *DESCRIPTION
776a71e423f00192c53ea99be889f587 *INDEX
77e993dd6e717e675de9821c09a1844f *MSIsensor/MSIsensDing.csv.gz
95c9ff0370873c95cb49f31a6af85b0f *MSIsensor/dingMSI.rda
cf5b057ee25b5694ab4c08398bf101a4 *Meta/Rd.rds
9038ccf3efdea4f6eb3c6bfcade6fa73 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
7c8ad8ae5960c25d7cd130201243f23a *Meta/hsearch.rds
c145e8ba0a26b8c3a2e512b266aae173 *Meta/links.rds
3e492e7c7036390b715b8f557d4cefcc *Meta/nsInfo.rds
d087417c262698eabd01df2c12f04d0c *Meta/package.rds
2edf2995760d448ef8003700a99451fa *Meta/vignette.rds
0532890aef7c9c52390b3f62ffb99bb2 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/BiocOncoTK
7d01351b7444bf69dec3aabeb60fe89d *R/BiocOncoTK.rdb
043c25c940df39dc80a1212882d060e1 *R/BiocOncoTK.rdx
ed0d0755cbe662b4c4528ac1dd3cb1e7 *data/Rdata.rdb
8805ce5ac0f466fcd49b759150ecb5b6 *data/Rdata.rds
f8fcd3e795803ceb74d625ff158424f9 *data/Rdata.rdx
f7e0bdfd97580b46415a6cab32d5ecb5 *doc/BiocOncoTK.R
0edd56a5d1ff634dfc0c53c5a637aa57 *doc/BiocOncoTK.Rmd
7da5a03a893320468573ac048e07077b *doc/BiocOncoTK.html
77a0ec59669007c221d5d0da9fffab4c *doc/curatedMSIData.R
92cd58130920b0df9e2b092b6afafb12 *doc/curatedMSIData.Rmd
d567979981fa3c4f7cf448d70dad71fc *doc/curatedMSIData.html
268c74e7519e6d92bb6bb239305a1a1f *doc/index.html
8cfd261c256611a65dfe58e63700d051 *doc/maptcga.R
f724858d731a4c0ef2e01fc3047ecc59 *doc/maptcga.Rmd
64ebab77cd96060e56900bd69ee504a8 *doc/maptcga.html
28a61a2f71f5872d0e1836663ed78147 *help/AnIndex
962dd34b6773f18510d598a77422862b *help/BiocOncoTK.rdb
9591b8f0e42ef58b37f00791f72b89d4 *help/BiocOncoTK.rdx
e9290199b1c5a524dd8fc2725672e1b7 *help/aliases.rds
b243876e99494be1a6b17e212ce40884 *help/paths.rds
8f3a9f81f2e8f8506c4515f977098310 *html/00Index.html
e8ee34f1338f5d8cc35d0bef7317c945 *html/CCLE_DRUG_BROAD.html
6d6f08cd1ca5167a23778e3914fd51d5 *html/MSIsensor.10k.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5832f639bc5d5465cefb913ce16d3d0d *html/TcgaMutCounts.html
aacd8afe3162d3f9aeb161d602ac8759 *html/TcgaNIndWithAnyMut.html
8b725ace926717632aa9cc559e638a25 *html/add_sym.html
f2609ddfd9a35a3bbb15383e88e9d69f *html/annotTabs.html
4bb3c32ac1514151c236633b0104c76d *html/bindMSI.html
6e6a7319cb952e57206a089cb7932524 *html/bipg_tests.html
c054fb6dab2076fbe76e62b773ee8213 *html/brcaMAE.html
6c72efea451aed48f3a04686b1e9c40b *html/buildPancanSE.html
faca4f9ea374a550193dad96b7405b38 *html/cell_70138.html
b995268149ebdbf77e9012b0747886a0 *html/clueDemos.html
b2ca127110320ed3b05054eb81043b8e *html/clueServiceNames.html
783e048cd479edda46a6ce667f735eb2 *html/darmGBMcls.html
14613dc5201985450418fad9b4d1fdac *html/dingMSI.html
e7d4ecf907487c1eeaf95f89af764bca *html/featIDMapper.html
f371ad5f250fcf05f44ec897170cf976 *html/fireMSI.html
59bb8b9baf91ae59ffb6178d95b92389 *html/get_plates.html
cd207c9eb0bfa6caeff2e5cdd65396e8 *html/ggFeatDens.html
c926fc6921ec2eea29a00c54d240da9d *html/ggFeatureSegs.html
726a99a1a8edde21bfd2bc9dc7b6836c *html/ggMutDens.html
385c390b1255cb7bd02e2bca080a7e02 *html/icd10_c.html
2c1597d1a2bea6cc6111d75afcb5a041 *html/k23sig.html
bf7974b93e970212a84167ae41be00d1 *html/kang_DNArepair.html
0c2ecfe04b321e96223b691ca45cdc3e *html/loadPatel.html
ccb6f14e7a2c8cf74ec35acabe489871 *html/log10pl1.html
26698018c694c4e054645e617a0a29f8 *html/map_tcga_ncit.html
7b95b38639a08d51f4b8db7f6d4048e2 *html/mc3toGR.html
25ea4f706b2ce3bbb1f501a3da8a6de2 *html/molpo_3utr.html
562a239fdf52ab37b23082bc80577842 *html/molpo_5utr.html
e65aed3569a04df7d15b9c844043daf2 *html/molpo_CDS.html
ee101488aaf56f77a301cde4536598e0 *html/molpo_WGS.html
9fc32cf13e2f86d2419378eef4d3af67 *html/multiviz.html
ad5f2537b92dad0c23641eb9b09ad46d *html/oncoPrintISB.html
5893d88359d9d7b2861c84d44b0c7d7d *html/pancan.clin.varnames.html
e640868d73350db524a4f1dece7e84bf *html/pancan_BQ.html
09daa03e1d40b90722b31bc87af8c83f *html/pancan_app.html
7743ac43da98b801b95473d984588fb2 *html/pancan_clinicalTabVarnames.html
1b2c350d0a74f2b0c64fc122ddd83267 *html/pancan_longname.html
d95dd786dd6be3806233fdee5bd77d5a *html/pancan_sampTypeMap.html
233d71f3294736a42c7c2b56918daae1 *html/pancan_tabulate.html
14ee2684963e5cb389302fcf9c1ed5cf *html/patient_to_tumor_code.html
b618a01694a8d479e3935e7338628764 *html/pertClasses.html
65caed2c730a55a3d4e66fd777809031 *html/pert_70138.html
eb5b354d8d8da010c3d82fa48c24c718 *html/query_clue.html
e06fbdfb91530d7a1a3db28c934b1fc1 *html/reexports.html
e0219647f29a526b203b869b0e0f2088 *html/replaceRownames.html
39f873eec4e41f7683e87ba367bf1e0c *html/small_msi.html
98e94f1797f4c0f7d43b08f0c8cc1571 *html/tumNorSet.html
84a28df4a1f56e5df574098e0736e847 *html/utils.html
ee0a48d314d39bc9024bc4a12bcf27ba *html/viz_msi_raw.html
254e957812df34419038d0d8716166cc *mocks/NRAS_AHR.rda
6f146e3944b5a7ae2ac4e19d834ca496 *mocks/ccleNRAS.rda
81212ffde9b9b221badfe6351cf662a2 *mocks/nrasdf.rda
4b760e9c2b1b6161313cbf424ba1240c *pamphlets/bioccl.bib
ba62444a2f42ce25cc7d325e011b39eb *pamphlets/bioccl0518.Rmd
52df8b94522fb24e0b21d5b658a6d0fc *pamphlets/bioccl1018.Rmd
06957737de4e4f43c89228b67608105c *pamphlets/blcaMAE.rda
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3c5c686f0f72da3d4ecb4e62a773ba49 *pamphlets/pancode.png
148913ad335345962318942ab06db8d2 *pamphlets/panelCode.png
0cbb112fee74a1dc2e1c7656050d4b6b *scripts/do5utr_script.R
bb6f4fdeebb85ad9e6e9d034a4cd6377 *scripts/doCDS_script.R
9341d8301f7770f2d2643bc0a1e5d669 *scripts/msireg/exprByMSI_csv.R
5aad69bd2982e9eb530e1c3cee2d9725 *scripts/msireg/rbind_RDS_to_RDS.R
4a2c589b9bc35637ac8374787ec1f66a *scripts/msireg/rbind_csvs_to_RDS.R
7196cff540496e41331dbcc6b3db4fca *scripts/msireg/report_patients_by_txg.wdl
629aa13c70eeea2ec51a73957497843a *scripts/msireg/survey_tcga_tumors.wdl
