BgeeMetadata-class {BgeeCall} | R Documentation

## BgeeMetadata S4 class

### Description

An S4 class that contains all information to retrieve intergenic regions generated by Bgee.

### Slots

`intergenic_release`

  Bgee intergenic release that will be used

`all_releases`

  list of all reference intergenic releases that can be used to generate your present/absent expression calls.

`intergenic_prefix`

  String used to generate an intergenic release specific output directory

`custom_intergenic_path`

  path to a local version of reference intergenic fasta file. If NULL (by default) the reference intergenic fasta file will be downloaded. If not NULL BgeeCall will merge this local reference intergenic file with the transcriptome. Except if you generated your own intergenic regions always keep it NULL.

[Package BgeeCall version 1.3.1 Index]