c43a2c3cc47a61fe9b94a9a02a6777c8 *DESCRIPTION
91d413d5150ec06f174978545498270d *INDEX
9cb9f1b8354172ac376fd5d08e1b5416 *Meta/Rd.rds
294a817879c758a65bb0e84509049581 *Meta/data.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c9e5dc8bc3276707623889a7c9bce80b *Meta/hsearch.rds
ba339718fd62471c48093e11a820ab50 *Meta/links.rds
daf01e1f27bf725514c9f6f69d683a52 *Meta/nsInfo.rds
8556488196b6f585e46c45a2cf4a6552 *Meta/package.rds
f75a8901a533df3ba8db166f84f3e9ae *Meta/vignette.rds
ae59b8a6e95d660b2b63a851c68911a9 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/Basic4Cseq
d558e5f22b490827323fa00fc54c6e24 *R/Basic4Cseq.rdb
d7249bce0e13ff1af178f46f54210638 *R/Basic4Cseq.rdx
371a0994c3f3c2931aed600ac0183fde *data/liverData.RData
ba5c985bdae524e41b9b8a24d0cebb38 *data/liverDataRaw.RData
cb12cab230a19f7373dab080cd9dfade *doc/index.html
0cded5c665295c5748d19bad3ffdd592 *doc/vignette.R
67392a702c2453b846903e0c1a42e6c0 *doc/vignette.Rnw
d4a58e9aa6a662a7b0125e12b6293044 *doc/vignette.pdf
b90cc5bc0dca1138debae1179cb813f8 *extdata/RCircos_GRCm38_ideogram.csv
6cbaecaf4ed2293298343bfce751c258 *extdata/RCircos_HG19_ideogram.csv
00c1d1d92fa3a07f3403a5c039f899c7 *extdata/enzymeData.csv
6332710cc1a1ee8ef40cb95538a94929 *extdata/fetalLiverCutter.sam
4f671ebe3f1c6dc00177f7d50b8944df *extdata/fetalLiverShort.bam
614b15a01e9f8d0bd62458ec969845c7 *extdata/fetalLiverVP.bed
ab13942a15e17712f182b3b1c1e0363a *extdata/fetalLiver_finalFragments.csv
a3e529247e47214266dd2a252dfb039b *extdata/transInteractionData.txt
d39a2c0c80702059da9c6f99ae18a212 *extdata/veryShortExample.fastq
a80e603e40f7343b0bb97c1380df61c8 *extdata/veryShortLib.csv
e9e6b8add27c84f481a1839f9db793d1 *extdata/veryShortReference.fasta
ac34dfc4f22e37a2a286f31ddf7ecceb *extdata/veryShortReference.fasta.amb
06d4a319a43ef8e7bf7f0090e14e6433 *extdata/veryShortReference.fasta.ann
88c3629f9b4134224e100e04d1fcc251 *extdata/veryShortReference.fasta.bwt
cfc9149681143ca9aff12fe0842e34d1 *extdata/veryShortReference.fasta.pac
3748a2acac76bf91845f10bd7df8dabb *extdata/veryShortReference.fasta.sa
e914f0f7d046dc7494eeb2e2d3348ed2 *extdata/vfl_aagctt_catg_mm9_54_vp.csv
cb8113f292b6668dd86d61425d18203a *help/AnIndex
989c1f94066503b9464ba9f91de9b9a5 *help/Basic4Cseq.rdb
b54a487499c8c21f791c6e0f41a51d8a *help/Basic4Cseq.rdx
ace64127d8cfe55c6e7ef48c20437922 *help/aliases.rds
b6054f364437b6845c14b4fe67087b34 *help/paths.rds
10387dcacd806ab1fc1d6fc91292d8f0 *html/00Index.html
8eb0170b180ac48962bba17739ee2470 *html/Data4Cseq-class.html
1316975689c6e864f02fc8652b577185 *html/Data4Cseq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
644ff3ae58c0ef29c40cd7d5319d4d4e *html/checkRestrictionEnzymeSequence.html
1c6420bb4e266e011dc224d1473168e0 *html/chooseNearCisFragments.html
f9d02c95564b80f582933c1f299f13fb *html/createVirtualFragmentLibrary.html
225ed7fd312de67a35cf2c597df92b0c *html/drawDigestionFragmentHistogram.html
4de6b5905657530a635c7d82c36e008e *html/drawHeatmap.html
5a3a96daef3edcc5ed4ae0f8c856e45f *html/exportVisualizationFragmentData.html
053d90e50fd1de0cad794c1fcf9a520b *html/getReadDistribution.html
1be25b5752e988b074cadc7896094532 *html/giveEnzymeSequence.html
5f09a1df38fc59905ee3ba5b534bd02e *html/importVisualizationFragmentData.html
f3e47e1fccd148454cb752dddcff3071 *html/liverData.html
9349972385a9ecbcedd7bb8571b78299 *html/liverDataRaw.html
faa0a10182f69638c034b88c6323a1f3 *html/normalizeFragmentData.html
2d69c9d73f11f09745a9e6a648c2ef57 *html/plotTransInteractions.html
5a5c9da880ecc3ba9bac4abd3fbfafe5 *html/prepare4CseqData.html
af21d63dfea401207915a09c8c8be59a *html/printBEDFragmentLibrary.html
471c72f53fe47d949ed9abadafcfb521 *html/printWigFile.html
45339546cb7a74a0cc62379831d7e0a5 *html/readPointsOfInterestFile.html
f5294d357e61ce95798128bd83a483fc *html/readsToFragments.html
7e960dd608db3b2f29b4f3ffe5275b33 *html/simulateDigestion.html
fe7921cc89f4e2c9a2c1a6f57db1f4ea *html/visualizeViewpoint.html
