BASiCS_Draw {BASiCS} | R Documentation

## Generate a draw from the posterior of BASiCS using the generative model.

### Description

`BASiCS_Draw` creates a simulated dataset from the posterior of a fitted model implemented in BASiCS.

### Usage

    BASiCS_Draw(
      Chain,
      BatchInfo = gsub(".*_Batch([0-9a-zA-Z])", "\\1",
        colnames(Chain@parameters[["nu"]])),
      N = sample(nrow(Chain@parameters[["nu"]]), 1)
    )

### Arguments

`Chain` | An object of class `BASiCS_Chain`.
`BatchInfo` | Vector of batch information from the SingleCellExperiment object used as input to BASiCS_MCMC.
`N` | The integer index for the draw to be used to sample from the posterior predictive distribution. If not supplied, a random value is chosen.

### Value

An object of class `SingleCellExperiment`, including synthetic data generated by the model implemented in BASiCS.

### Author(s)

Alan O'Callaghan

### References

Vallejos, Marioni and Richardson (2015). PLoS Computational Biology.

### Examples

    data(ChainSC)
    BASiCS_Draw(ChainSC)

    data(ChainSC)
    BASiCS_Draw(ChainSC)

[Package BASiCS version 1.99.1 Index]