# Create rapid visualizations of RNAseq data in R

## Documentation for package ‘vidger’ version 1.8.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

df.cuff | A 'cuffdiff' example dataset
df.deseq | A 'DESeq2' example dataset
df.edger | A 'edgeR' example dataset
vsBoxPlot | Box plot for log_{10}(FPKM or CPM) distributions
vsDEGMatrix | Differential gene expression matrix
vsFourWay | Four-Way plot for comparison of log fold changes in a multiple factor RNA-seq experiment from different analytical objects
vsMAMatrix | MA plot matrix from log_{2} fold changes and -log_{10}(p-values)
vsMAPlot | MA plot from mean expression and log fold changes from different analytical objects
vsScatterMatrix | Scatter plot matrix of log_{10}(FPKM or CPM) values
vsScatterPlot | Scatter plot of log_{10}(FPKM or CPM) values
vsVolcano | Volcano plot from log_{2} fold changes and -log_{10}(p-values)
vsVolcanoMatrix | Volcano plot matrix from log_{2} fold changes and -log_{10}(p-values)