score_regions {target} | R Documentation

## Calculate region scores

### Description

Calculate the region score based on the distance to their assigned peaks.

### Usage

    score_regions(peak_score, region_id)

### Arguments

`peak_score` | A vector of integers
`region_id` | A vector of character

### Value

A vector of numerics

### Examples

    library(IRanges)

    query <- IRanges(c(1, 4, 9), c(5, 7, 10))
    subject <- IRanges(c(2, 2, 10), c(2, 3, 12))
    distance <- find_distance(query, subject)
    peak_score <- score_peaks(distance, 100000)
    region_id <- c('region1', 'region1', 'region2')
    region_score <- score_regions(peak_score, region_id)

[Package target version 1.2.0 Index]