becbaf07ebb3463e22bd788df2a380a8 *DESCRIPTION
2c2cf706303e396146a166d6c6f38baa *INDEX
ee4ee4dc1c6a082c68ea2d6fa63c7b65 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
fadcb5bf90b32c9caa4f4a882a663ba9 *Meta/hsearch.rds
f5f1b016e5d6e5b4a745c2b4d4fa0f71 *Meta/links.rds
228464f5a9c5b7aad54d7a9ac010616d *Meta/nsInfo.rds
42e2d488ca9687bed92bb59ae528159d *Meta/package.rds
44ea2fd444a383c5ae0f89fa37f9f8bf *Meta/vignette.rds
9f0e28d2a1680871f36cf54c97dde6b9 *NAMESPACE
307664ec41b7a3ee91aed15d9bbb768f *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/strandCheckR
a781b923f64f25d7dee283d2c0c3fcf4 *R/strandCheckR.rdb
ada2569a44542d6ec6f8bcffee7bc2b5 *R/strandCheckR.rdx
5c58ae41b6f8f4ad93d041d664a71280 *doc/index.html
c50aa6bcfa129aeeb93dc71db18d5ea3 *doc/strandCheckR.R
de4dd852b1f096ccb6aafdf6363cc0ac *doc/strandCheckR.Rmd
8b889e3d14b8b7ab704e6a0ced955c9c *doc/strandCheckR.html
ed5b094495e4e83d6c68004d9d3715b0 *extdata/paired.bam
14fcdde3cd6e13a3cdec05a54a49df80 *extdata/paired.bam.bai
87b830c5c67d3216845c9448e4fa5956 *extdata/s1.sorted.bam
50d445561527631d7b59846854983f62 *extdata/s1.sorted.bam.bai
d316a25ab0fa5a6017e307a9b9417862 *extdata/s2.sorted.bam
4d1f004683222525a28bbaa019ce06c6 *extdata/s2.sorted.bam.bai
526c85368278782223279596cb372400 *help/AnIndex
3cddc7a35774362bef31c84c0b38f32d *help/aliases.rds
0d9900ad5dbdc246faf4a3ef6e4cc3f9 *help/paths.rds
444bfcf9f6e54d987f91ce7e4448d7e3 *help/strandCheckR.rdb
19fff0c1d0aad42866eca82ce711da4c *help/strandCheckR.rdx
8309a192592301093a5605aa257e070f *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9b283262cb2845dcc9e49d5401c5565c *html/calculateStrandCoverage.html
346d3c39116cdb755b23ae9bc189e8c7 *html/calculateStrandNbReads.html
075c3a12deb1fa23ef8ec90c3dec9f2b *html/checkPairedEnd.html
a2aab4be3d07cf85d98f129dd6969fdc *html/concatenateAlignments.html
6cb05de1e4745950d70a32dfd5d8a60c *html/filterDNA.html
74abf8e6817bfc57f7904d851fe29fff *html/getWinFromBamFile.html
eae886118fa51cb249a4d26eda9fd4fb *html/getWinFromGranges.html
66410b44140cad3c3e9a0962f5d4526b *html/getWinFromIRanges.html
6276451c6e4063c020fdb1a0f93460ec *html/getWinFromReadInfo.html
efadd2e25e51e60d029a17ade674162a *html/getWinOfAlignments.html
7fde5c3fea2a4e14bb46f2695dfd6868 *html/intersectWithFeature.html
1f76d4b992194a017f7a1381f581e2b1 *html/keptProbaWin.html
3c18e20603566d442a7085366bfa2b0d *html/keptReadFragment.html
56b9fcacac5a711d782be45fb1abb866 *html/plotHist.html
4710d3a27708ae56e52e42879f61cfe4 *html/plotWin.html
a552852a919020c548505f0e0b6d2038 *html/strandCheckR-package.html
5af7e06c005ad533c92f304d192f2ec8 *html/summarizeHist.html
