inferTypeIChannel {sesame} | R Documentation

## Infer and reset color channel for Type-I probes instead of using what is specified in manifest

### Description

Infer and reset color channel for Type-I probes instead of using what is specified in manifest

### Usage

    inferTypeIChannel(
      sset,
      switch_failed = FALSE,
      verbose = FALSE,
      summary = FALSE
    )

### Arguments

`sset` | a `SigSet`
`switch_failed` | whether to switch failed probes (default to FALSE)
`verbose` | whether to print correction summary
`summary` | return summarized numbers only.

### Value

a `SigSet`, or numerics if summary == TRUE

### Examples

    sset <- sesameDataGet('EPIC.1.LNCaP')$sset
    inferTypeIChannel(sset)

[Package sesame version 1.6.0 Index]