topLoci {sesame} | R Documentation

## Top loci in differential methylation

### Description

This is a convenience function to show top differential methylated segments. The function takes a coefficient table as input and output the same table ordered by the sigificance of the locus.

### Usage

    topLoci(cf1)

### Arguments

`cf1` | coefficient table of one factor from diffMeth

### Value

coefficient table ordered by p-value of each locus

### Examples

    data <- sesameDataGet('HM450.76.TCGA.matched')
    cf <- DMR(data$betas, data$sampleInfo, ~type)
    topLoci(cf[[1]])

[Package sesame version 1.6.0 Index]