dyeBiasCorr {sesame} | R Documentation

## Correct dye bias in by linear scaling.

### Description

The function takes a `SigSet` as input and scale both the Grn and Red signal to a reference (ref) level. If the reference level is not given, it is set to the mean intensity of all the in-band signals. The function returns a `SigSet` with dye bias corrected.

### Usage

    dyeBiasCorr(sset, ref = NULL)

### Arguments

`sset` | a `SigSet`
`ref` | reference signal level

### Value

a normalized `SigSet`

### Examples

    sset <- sesameDataGet('EPIC.1.LNCaP')$sset
    sset.db <- dyeBiasCorr(sset)

[Package sesame version 1.6.0 Index]