detectionPoobEcdf {sesame} | R Documentation

## Detection P-value based on ECDF of out-of-band signal

### Description

aka pOOBAH (p-vals by Out-Of-Band Array Hybridization)

### Usage

    detectionPoobEcdf(sset, force = FALSE)

    pOOBAH(sset, force = FALSE)

### Arguments

`sset` | a `SigSet`
`force` | force rerun even if result already exists

### Details

The function takes a `SigSet` as input, computes detection p-value using out-of-band probes empirical distribution and returns a new `SigSet` with an updated pval slot.

### Value

detection p-value

### Examples

    sset <- makeExampleSeSAMeDataSet()
    sset <- detectionPoobEcdf(sset)

    sset <- makeExampleSeSAMeDataSet()
    sset <- pOOBAH(sset)

[Package sesame version 1.6.0 Index]