gc_per_read {qckitfastq} | R Documentation

## Calculate GC nucleotide sequence content per read of the FASTQ gzipped file

### Description

Calculate GC nucleotide sequence content per read of the FASTQ gzipped file

### Usage

    gc_per_read(infile)

### Arguments

`infile` | A string giving the path for the fastqfile

### Value

GC content perncentage per read

### Examples

    infile <- system.file("extdata", "10^5_reads_test.fq.gz", package = "qckitfastq")
    gc_per_read(infile)[1:10]

[Package qckitfastq version 1.4.0 Index]