plot_adapter_content {qckitfastq} | R Documentation

## Creates a bar plot of the top 5 most present adapter sequences.

### Description

Creates a bar plot of the top 5 most present adapter sequences.

### Usage

    plot_adapter_content(ac_sorted, output_file = NA)

### Arguments

`ac_sorted` | Sorted table of adapters and counts.
`output_file` | File to save data frame to. Default NA.

### Value

Barplot of top 5 most frequent adapter sequences.

### Examples

    if(.Platform$OS.type != "windows") {
    infile <- system.file("extdata", "test.fq.gz", package = "qckitfastq")
    ac_sorted <- adapter_content(infile)
    plot_adapter_content(ac_sorted)
    }

[Package qckitfastq version 1.4.0 Index]