getOmicsDataset {pwOmics} | R Documentation

## Get Omics dataset.

### Description

This function returns the omics datasets of the experiment.

### Usage

    getOmicsDataset(data_omics, writeData = FALSE)

### Arguments

`data_omics` | OmicsData object.
`writeData` | boolean value indicating if datasets should be written into csv file.

### Value

list with protein data set as first element and gene data set as second element; both elements contain matrices with significant proteins/ genes/transcripts at the given time points.

### Examples

    ## Not run:
    data(OmicsExampleData)
    data_omics = readOmics(tp_prots = c(0.25, 1, 4, 8, 13, 18, 24),
    tp_genes = c(1, 4, 8, 13, 18, 24), OmicsExampleData,
    PWdatabase = c("biocarta", "kegg", "nci", "reactome"),
    TFtargetdatabase = c("userspec"))
    getOmicsDataset(data_omics)

    ## End(Not run)

[Package pwOmics version 1.20.0 Index]