primirTSS {primirTSS} | R Documentation

## primirTSS: Search for putative TSSs of miRNA

### Description

A fast, convenient tool to identify the TSSs of miRNAs by integrating the data of H3K4me3 and Pol II as well as combining the conservation level and sequence feature, provided within both command-line and graphical interfaces, which achieves a better performance than the previous non-cell-specific methods on miRNA TSSs.

### Detail

See `find_tss` for deailted instruction to predict TSSs of miRNA; See `run_primirTSSapp` to predict TSSs of miRNA using graphical web interface.

### Author(s)

Maintainer: Pumin Li ipumin@163.com

Other contributors: Qi Xu xuqi@vip.qq.com

### See Also

Useful links: Xu HUA et al

[Package primirTSS version 1.6.1 Index]