b978dd7ef8617b51972cd47006cebd2c *CITATION
54584e2d038ba8403a9f82ef0edfa002 *DESCRIPTION
81c66aa8111d8ab9c1426ed9961f3e3b *INDEX
057cbcf5288db06fee0ff4c546189a57 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
49fdd8541b48a2d8ef41cb13dcae5b95 *Meta/hsearch.rds
be68ef533819aae8897087bfde5925bf *Meta/links.rds
ef3d34ddec9bf38775794edeab5674d0 *Meta/nsInfo.rds
b4ad53d0917eb271f1a0743d854cfb5b *Meta/package.rds
531ad0616ccf737997fa70aa70375e8b *Meta/vignette.rds
ee5e13c6344dd81e1ae6ae2e5c21aaa8 *NAMESPACE
3fdcdc83f41a05d57b850231e2e1ab49 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/pram
fb9e354b3f1eedc8098235ceb0121eff *R/pram.rdb
9f3d8f104fa92dfda265efdf4e29d45c *R/pram.rdx
9e58ad003138d1c66a70d0d10db3d418 *doc/index.html
824b85569f10f7b0abc4c47926d0b13a *doc/pram.R
a4e2076d4e1656856bc8f3c1da25efc5 *doc/pram.Rmd
0a1c132ac0e4a802ad09f02aa7dab504 *doc/pram.pdf
6bc8dfb54b9e62665f41741b2609367c *extdata/bam/CMPRep1.sortedByCoord.clean.bam
3c00bc5d9e5b4e0f16b1f0a1821d63d7 *extdata/bam/CMPRep1.sortedByCoord.clean.chr10.plus.bam
cd18f07d323eec235e4f443244268ec9 *extdata/bam/CMPRep1.sortedByCoord.clean.chr12.minus.bam
ddf08b29acc438c11554daf480bf1699 *extdata/bam/CMPRep1.sortedByCoord.raw.bam
aca49d6b6a2ffd81f81b2f56d0b40e02 *extdata/bam/CMPRep2.sortedByCoord.clean.bam
ab783a9429dbd68054ab1e202589d6f6 *extdata/bam/CMPRep2.sortedByCoord.raw.bam
c72525196731ba5c7a453634e02c245e *extdata/benchmark/plcf.tsv
0dc29665caca31ba0542276d3b7609c0 *extdata/benchmark/tgt.tsv
312a28fd4191383057964266227d6622 *extdata/chromsize/hg19.tsv.gz
0ec9c7b98e125033f6b712211c82e71e *extdata/chromsize/hg38.tsv.gz
7a546ec366f0387ef4d6da49fec1b6d1 *extdata/chromsize/mm10.tsv.gz
bcfe201a8da1b4b4dd7e69d6962d82fc *extdata/chromsize/mm9.tsv.gz
c91b4bd76f65ff4982a7c32187a194de *extdata/demo/SZP.bam
2bff64cd1a98e2a008a3a05aa3fa54e0 *extdata/demo/TLC.bam
c8ff38a72ebd56b20e9b954a12f6800e *extdata/demo/in.gtf
88418451ac78fa3dd45bf4bd49a8f5e5 *extdata/gtf/defIgRanges_in.gtf
162b125396864c90049ee15a5fca22a6 *extdata/gtf/gnc_v24_minus_chr18.gtf
a7cc0cbac78919adb1e6fcb74f8e6ee1 *extdata/gtf/ig_mm10_chr12.gtf
a3b6aa1d02a8bb0f7997d6607c45caf3 *extdata/gtf/selModel_in.gtf
0624089e8191beec85a3ce578e059b08 *extdata/gtf/selModel_out.gtf
e88e53a580084e44f21144a99e466015 *extdata/vignettes/pram.pdf
b97f7004555545b4e69a075419d407b2 *help/AnIndex
ce4790f1fcb52d8354cdc4c8ada2b7a4 *help/aliases.rds
138fc5d7aa719a826b481840793cabb8 *help/paths.rds
cda4f37123bc0032b7c34c2f66f1a185 *help/pram.rdb
ee854ffcf7597e6610c96755470dbd3a *help/pram.rdx
8a825b543e839f9aa470a3dbb3fcb8a2 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4a49e7a47dfc09b7352236f016d90072 *html/buildModel.html
f1d86a29b5f56e837f967b25d6724b81 *html/defIgRanges.html
9f6b1751372d7a818b73d68117ff3904 *html/evalModel.html
247685ba4b45ea7c97d53a25ca5a9c12 *html/prepIgBam.html
709cc3b410300ab12b1cf251170bd963 *html/runPRAM.html
2b4ee2c3a4049cc325a145291197d07d *html/selModel.html
