processing_history {pmp} | R Documentation

## Return history of applied functions and argument from pmp package.

### Description

Return history of applied functions and argument from pmp package.

### Usage

    processing_history(df)

### Arguments

`df` | A matrix-like (e.g. an ordinary matrix, a data frame) or RangedSummarizedExperiment-class object with all values of class `numeric()` or `integer()` of peak intensities, areas or other quantitative characteristic.

### Value

List of function names and argument values.

### Examples

    df <- MTBLS79[ ,MTBLS79$Batch == 1]
    df$Class[1:2] <- "Blank"
    out <- filter_peaks_by_blank(df=df, fold_change=1.2,
       classes=df$Class, blank_label="Blank", qc_label=NULL,
       remove_samples=FALSE, remove_peaks=TRUE, fraction_in_blank=0)
    processing_history(out)

[Package pmp version 1.0.0 Index]