getBaseProfile {oligo} | R Documentation

## Compute and plot nucleotide profile.

### Description

Computes and, optionally, lots nucleotide profile, describing the sequence effect on intensities.

### Usage

    getBaseProfile(coefs, probeLength = 25, plot = FALSE, ...)

### Arguments

`coefs` | affinity spline coefficients.
`probeLength` | length of probes
`plot` | logical. Plots profile?
`...` | arguments to be passed to matplot.

### Value

Invisibly returns a matrix with estimated effects.

[Package oligo version 1.52.1 Index]