writeQueryFile {netDx} | R Documentation

## Wrapper to write GeneMANIA query file

### Description

Wrapper to write GeneMANIA query file

### Usage

    writeQueryFile(qSamps, incNets = "all", numReturn = 1L, outFile,
      orgName = "predictor")

### Arguments

`qSamps` | (char) vector of patient IDs in query
`incNets` | (char) vector of networks to include in this analysis (features/pathway names). Useful for subset-based feature selection
`numReturn` | (integer) number of patients to return in ranking file
`outFile` | (char) path to output file
`orgName` | (char) organism name

### Value

No value. Side effect of writing the query file to `outFile`

### Examples

    data(pheno)
    writeQueryFile(pheno$ID[seq_len(5)], 'all',nrow(pheno), 'myquery.txt')

[Package netDx version 1.0.3 Index]