dcf427f22f04128570f1d58476f311b4 *CITATION
e33e032e67f77386de7bb2914b96ed1b *DESCRIPTION
5544753131d9ee908f786a1b456e0526 *INDEX
8791b2189d2ddf930a93f98cdabc3b50 *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c9dd09f02f08c2e96d510838efa8d656 *Meta/hsearch.rds
5df3365c90dea942805e858ec4e217a0 *Meta/links.rds
a6542a6ffe596cfaa27d755b1f2ae1ee *Meta/nsInfo.rds
5fa86167ad49d368b1c8fe6b6e03769d *Meta/package.rds
e21cab5493800c855c92c68bb71b87a4 *Meta/vignette.rds
8b13203d21b38f8e40b82a56146221c3 *NAMESPACE
d6424224e3e1862c55673b0861c40aef *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/motifcounter
44601889bddd18943c3460d6000840b0 *R/motifcounter.rdb
eeea212dccf753b07d6ea68ee5c9a36c *R/motifcounter.rdx
8d19a5d7e38a6ebf1d7ef41ae23963a5 *doc/index.html
c04bca2ce03499fbb1a6a3123628345c *doc/motifcounter.R
4522999932c71a38ebe74b53da6cb32a *doc/motifcounter.Rmd
3498d24f5c4386a423aaf5b4e1696d63 *doc/motifcounter.html
50df954ee79d0f5a78eb73d8bc322d4c *extdata/m1.tab
6441842ee60b856a7dbd3e8269175572 *extdata/m12.tab
ab7fc1464e844415056df107769f4b64 *extdata/m2.tab
072c2db184ea9dd62de9a67c747edc44 *extdata/oct4_chipseq.fa
5b38fa6389b08d3a65f21294be7aee07 *extdata/seq.fasta
f142bb690529139fed13c75e0ecbaac4 *extdata/seq1.fasta
9cc226e7e9a2a7797dff257bc31ac5a1 *extdata/seq2.fasta
3b458d2042a7ab6a93442abe29c9edbc *extdata/test.fa
d309d44d1afb8021344ff0e4aeca342a *extdata/test.tab
41a01add41f4e45303e61b6366f07eb9 *extdata/test2.fa
ce47118080dd2341e2af1b366911048c *extdata/x1.tab
0f7fd6131c16f42826fba4895e26b53f *extdata/x21.tab
0cf2f5d8c38b3d48158a42af0589b46c *extdata/x3.tab
85418671c5dc1dc29156d8bed9f1dc85 *extdata/x31.tab
0d596bc3216241c2ef0ac9f67d859305 *extdata/x32.tab
a63c9d9bde5e7d71d5e533284ae38d28 *extdata/x8.tab
3be84dbaba38c8f4b0b0ff4c395e430d *help/AnIndex
a6ccf030fcb7d468ff273e9754f01459 *help/aliases.rds
5fea3a7031838efc0dc686eb6f4ef248 *help/motifcounter.rdb
bb7905b71ba4e190899fd1f163e78ef6 *help/motifcounter.rdx
fbe85b7125c87925722b91b24b0a86a9 *help/paths.rds
bd5c3ddd7b40b2374643ef1691bb168b *html/00Index.html
345d3ae6567c86ffafbc5eea60ffcb45 *html/Background-class.html
60958bd2457cb05841439d69eb18e388 *html/Overlap-class.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4c2771d7f6c32992d79dd7b82d36f3a3 *html/clumpSizeDist.html
288ea4689d94b6e9d3d67fbdd5fb792a *html/combinatorialDist.html
c0fa80698640a80612b0903b49365362 *html/compoundPoissonDist.html
f95f66684727f5b2f2ca15d6624736cd *html/computeClumpStartProb.html
27c33d362ba33bd4e6ac5f9ea2cbd130 *html/generateDNAString.html
43e0feecb9a89d991f5ab3a25652b80b *html/generateDNAStringSet.html
466cd0b7e6d3754fb37d41d3c93f7c5c *html/getAlpha.html
c9e0fa102ad83b55bb0c17344e9fa8d8 *html/getBeta.html
eeba68e84655a343e265f9d7b6bf79dc *html/getBeta3p.html
4e05302a3ed4c85b441f8da53fc39df4 *html/getBeta5p.html
19bc29609e138d574e0e8b4aff0c8378 *html/getCounts.html
f0b1c5bdd8d42c45c7b7311cb344a93d *html/getGamma.html
4d03464bd867f6b551620c48860fa570 *html/getOrder.html
cb6f331a5259fc4d406d5dfb9d40ebc4 *html/getSinglestranded.html
168ca9c1a17a3cbe94eab56881ba7ccf *html/getStation.html
41c95fbab598b531fc84db6e0efb8ec6 *html/getTrans.html
f1559685477e8ee709d6f644eac7e7e1 *html/hitStrand.html
fee02bbfda947d43bc957e76406b9c48 *html/lenSequences.html
b38d8efc2a67644aa8bde15504960164 *html/markovModel.html
75789da538ca39505457d2dfc2fcaa3e *html/motifAndBackgroundValid.html
742f5174c4b755c80f638fcc8615ef63 *html/motifEnrichment.html
e727fa6abb10eef8e11060a235e9ca03 *html/motifHitProfile.html
eb46f125d20dee804545f2f03c3da08d *html/motifHits.html
b939036b02e928201f5b1a499c89f6fd *html/motifValid.html
1e9a8b4384af69e910ebfe790191072d *html/motifcounter-package.html
a855ec8708b8f899d1155e4f16532c42 *html/motifcounterOptions.html
a09d19742a8dc91496be653034fc5f3b *html/normalizeMotif.html
ead1d418a3cf2f8e1504705df580a241 *html/numMotifHits.html
86782930a8d8982ead7277754b8f927e *html/probOverlapHit.html
cade5078fab20b4991e5b66d5bbc9f9b *html/readBackground.html
5ee7e3b804081ee7165672e5b9ad9ef4 *html/revcompMotif.html
e9f70173a652a2156b3a610820e6f228 *html/scoreDist.html
ffc54caff31ab839aab43c926a109861 *html/scoreDistBf.html
329cb0c83820488cd28d98c294c14930 *html/scoreDistEmpirical.html
d2c901e3892e4e369643e921394a6e05 *html/scoreHistogram.html
80c5463f4d74d088041652970a5cef29 *html/scoreHistogramSingleSeq.html
dffb31514df9219281fcf363dab8b661 *html/scoreProfile.html
e32fb92282dec92b0d985f312d9f7cb6 *html/scoreSequence.html
62fc36b8f1fd4a7fbb92316b6f1b9449 *html/scoreStrand.html
c67e69a54d430d134ee53744ae15f821 *html/scoreThreshold.html
995567a5c444945a0efaedcaca3c84da *html/sigLevel.html
25e88dc14322b9bf94a8e1aaa67940e4 *html/simulateClumpSizeDist.html
1856b3a7e01d7f97dbe3df381a96ffa2 *html/simulateNumHitsDist.html
6ce75858b744840bd49d6c4784d38240 *libs/i386/motifcounter.dll
fcab9bdc21194a2284f67961046d5916 *libs/x64/motifcounter.dll
