hg19.exon.counts {metaseqR} | R Documentation

## Human RNA-Seq data with three conditions, three samples

### Description

This data set contains RNA-Seq exon read counts for 3 chromosomes. The data are from an experiment studying the effect of a long non-coding RNA related to the ASCL2 gene in WNT signaling and intestinal cancer. It has two conditions (CON, DOX) and four samples (CON_BR1, CON_BR2, DOX_BR1, DOX_BR2). It also contains a predefined `sample.list` and `libsize.list` named `sample.list.hg18` and `libsize.list.hg18`.

### Format

a `data.frame` with exon read counts and some embedded annotation, one row per exon.

### Author(s)

Panagiotis Moulos

### Source

GEO (http://www.ncbi.nlm.nih.gov/geo/)

[Package metaseqR version 1.28.0 Index]