get.weights {metaseqR} | R Documentation

## Get precalculated statistical test weights

### Description

This function returns pre-calculated weights for human, chimpanzee, mouse, fruitfly and arabidopsis based on the performance of simulated datasets estimated from real data from the ReCount database (http://bowtie-bio.sourceforge.net/recount/). Currently pre-calculated weights are available only when all six statistical tests are used and for normalization with EDASeq. For other combinations, use the `estimate.aufc.weights` function.

### Usage

        get.weights(org = c("human", "chimpanzee", "mouse",
            "fruitfly", "arabidopsis"))

### Arguments

`org` | `"human"`, `"chimpanzee"`, `"mouse"`, `"fruitfly"` or `"arabidopsis"`.

### Value

A named vector of convex weights.

### Author(s)

Panagiotis Moulos

### Examples

    wh <- get.weights("human")

[Package metaseqR version 1.28.0 Index]