topEvents {maser} | R Documentation

## Filter splicing events based on false discovery rate and PSI change.

### Description

Filter splicing events based on false discovery rate and PSI change.

### Usage

    topEvents(events, fdr = 0.05, deltaPSI = 0.1)

### Arguments

`events` | a maser object.
`fdr` | numeric, FDR (False Discovery Rate) cutoff.
`deltaPSI` | numeric, absolute minimum PSI (Percent spliced-in) change

### Value

a maser object.

### Examples

    path <- system.file("extdata", file.path("MATS_output"), package = "maser")
    hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h"))

    ## To select all events with minimum 10% change in PSI, and FDR < 0.01
    hypoxia_top <- topEvents(hypoxia, fdr = 0.01, deltaPSI = 0.1)

[Package maser version 1.6.0 Index]