read.ilmn.targets {limma} | R Documentation

## Read Illumina Data from a Target Dataframe

### Description

Read Illumina data from a target dataframe

### Usage

    read.ilmn.targets(targets, ...)

### Arguments

`targets` | data frame including names of profile files.
`...` | any other parameters are passed on to `read.ilmn`.

### Details

`targets` is often created by calling the function `readTargets`. Rows in `targets` are arrays and columns contain related array or RNA sample information.

At least one of the two columns called `files` and/or `ctrlfiles` should be present in `targets`, which includes names of summary probe profile files and names of summary control probe profile files respectively. This function calls `read.ilmn` to read in the data.

### Value

An `EListRaw-class` object. See return value of the function `read.ilmn` for details.

### Author(s)

Wei Shi

### See Also

`read.ilmn`

[Package limma version 3.44.3 Index]