shared.ratios {isobar} | R Documentation

## Shared ratio calculation

### Description

Calculate ratios of reporter proteins and subset proteins with shared peptides.

### Usage

    shared.ratios(ibspectra, noise.model, channel1 , channel2 , protein = reporterProteins(proteinGroup(ibspectra)), ...)

### Arguments

`ibspectra` | IBspectra object.
`noise.model` | NoiseModel object.
`channel1` | channel1 to compare.
`channel2` | channel2 to compare.
`protein` | proteins for which the calculation should be made.
`...` | Additional arguments passed to estimteRatio.

### Value

data.frame

### Author(s)

Florian P.\ Breitwieser

### See Also

`shared.ratios.sign`

[Package isobar version 1.34.0 Index]