infercnv-package {infercnv} | R Documentation

## infercnv: Infer Copy Number Variation from Single-Cell RNA-Seq Data

### Description

Using single-cell RNA-Seq expression to visualize CNV in cells.

### Details

The main functions you will need to use are CreateInfercnvObject() and run(infercnv_object). For additional details on running the analysis step by step, please refer to the example vignette.

### Author(s)

Maintainer: Christophe Georgescu cgeorges@broadinstitute.org

Authors:

- Timothy Tickle ttickle@broadinstitute.org

- Itay Tirosh tirosh@broadinstitute.org

- Maxwell Brown mbrown@broadinstitute.org

- Brian Haas bhaas@broadinstitute.org

### See Also

Useful links:

- https://github.com/broadinstitute/inferCNV/wiki

- Report bugs at https://github.com/broadinstitute/inferCNV/issues

[Package infercnv version 1.4.0 Index]