dat.fcs {immunoClust} | R Documentation

## immunoClust Cell-clustering Sample

### Description

`flowFrame` data sample with 10.000 events in 7 parameters.

### Usage

    data(dat.fcs)

### Details

This FCS sample is a reduced (10.000 events) dataset in flowFrame format of the first sample in the dataset of immunoClust, MACS-depleted populations datasets 2010. URL http://flowrepository.org/id/FR-FCM-ZZWB.

### Value

A `flowCore` `flowFrame` with 10.000 observations on the following 7 parameters.

`FCS-A`

  Forward scatter

`SSC-A`

  Sideward scatter

`FITC-A`

  CD14

`PE-A`

  CD19

`APC-A`

  CD15

`APC-Cy7-A`

  CD4

`Pacific Blue-A`

  CD3

### Source

http://flowrepository.org/id/FR-FCM-ZZWB

### Examples

    data(dat.fcs)

    ## process cell clustering
    dat.res <- cell.process(dat.fcs)

    ## apply asinh-transformation
    dat.fcs.transformed <- trans.ApplyToData(dat.res, dat.fcs)

    ## plot results
    splom(dat.res, dat.fcs.transformed)

[Package immunoClust version 1.20.1 Index]