go_vals {hipathia} | R Documentation

## Gene Ontology matrix of the BRCA gene expression dataset

### Description

Matrix of Gene Ontology terms activation values for the BRCA dataset. This matrix is computed from the Results object returned by the `hipathia` function by means of the `quantify_terms` function.

### Usage

    data(go_vals)

### Format

Matrix with 40 columns and 1654 rows. Row names are Gene Ontology terms and column names are the TCGA identifyers of the samples.

### Details

`go_vals <- quantify_terms(results, pathways, "GO")`

### Value

Matrix with 40 columns and 1654 rows. Row names are Gene Ontology terms and column names are the TCGA identifyers of the samples.

[Package hipathia version 2.4.0 Index]