RandomEnrichment-class {genomation} | R Documentation

## An S4 class for storing `getRandomEnrichment` function results

### Description

The resulting object stores the results of `getRandomEnrichment` function

### Slots

`orig.cnt`:

  number of features overlapping with query at `getRandomEnrichment`

`rand.olap.dist`:

  set of number of features overlapping with randomized queries at `getRandomEnrichment`

`log2fc`:

  log2 fold change calculated by dividing `orig.cnt` by mean(`rand.olap.dist`) and taking log2 of that result

`p.value`:

  P-value assuming `rand.olap.dist` has a normal distribution and comparing `orig.cnt` with that distribution

`rand.p.value`:

  p-value from randomization by calculation the proportion of how many times a random number of overlap exceeds the original number of overlap

### See Also

`getRandomEnrichment`

[Package genomation version 1.20.0 Index]