sig.oncotypedx {genefu} | R Documentation

## Signature used to compute the OncotypeDX signature as published by Paik et al 2004

### Description

List of 21 genes included in the OncotypeDX signature. The EntrezGene.ID allows for mapping and the mapping to affy probes is already provided.

### Usage

    data(sig.oncotypedx)

### Format

`sig.oncotypedx` is a matrix with 5 columns containing the annotations and information related to the signature itself (including a mapping to Affymetrix HGU platform).

### References

S. Paik, S. Shak, G. Tang, C. Kim, J. Bakker, M. Cronin, F. L. Baehner, M. G. Walker, D. Watson, T. Park, W. Hiller, E. R. Fisher, D. L. Wickerham, J. Bryant, and N. Wolmark (2004) "A Multigene Assay to Predict Recurrence of Tamoxifen-Treated, Node-Negative Breast Cancer", New England Journal of Medicine, 351(27):2817–2826.

### Examples

    data(sig.oncotypedx)
    head(sig.oncotypedx)

[Package genefu version 2.20.0 Index]