getNormBeta {funtooNorm} | R Documentation

## Computes Beta values from normalized signals

### Description

Computes Beta values from normalized signals

### Usage

    getNormBeta(object, offset = 100)

    ## S4 method for signature 'SampleSet'
    getNormBeta(object, offset = 100)

### Arguments

`object` | of type SampleSet
`offset` | default is 100 as Illumina standard

### Value

a matrix containing beta after normalization value for each CpG position and each samples

### Methods (by class)

- `SampleSet`: Computes Beta values from normalized signals

### Examples

    require(minfiData)
    pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
    mySampleSet=fromRGChannelSet(RGsetEx)
    b=getNormBeta(funtooNorm(mySampleSet))

[Package funtooNorm version 1.12.0 Index]