plot2D.TrajectorySet {flowcatchR} | R Documentation

## 2D projection of a `TrajectorySet` object

### Description

Provides a bird's eye view of a `TrajectorySet` object on a bidimensional space

### Usage

    plot2D.TrajectorySet(
      trajectoryset,
      frames,
      trajIDs = NULL,
      addGrid = FALSE,
      verbose = FALSE,
      ...
    )

### Arguments

`trajectoryset` | A `TrajectorySet` object
`frames` | A `Frames` object, used here to identify the limits of the region of interest
`trajIDs` | A vector containing the ids of the desired trajectories
`addGrid` | Logical, add an additional grid to the 2-dimensional plot (visual aid for backtracking trajectory point locations)
`verbose` | Logical, whether to provide additional output on the command line
`...` | Arguments to be passed to methods

### Details

This function extracts the region of interests from the dimensions of an image of the `Frames` object, and afterwards plots the x-y-time representation of the identified trajectories on a 2d plane. It is possible to subset the `TrajectorySet` object with the IDs of the desired trajectories

### Value

`plot2D.TrajectorySet` returns an invisible `NULL`.

### Author(s)

Federico Marini, marinif@uni-mainz.de, 2014

### Examples

    data("MesenteriumSubset")
    data("candidate.platelets")
    platelets.trajectories <- trajectories(candidate.platelets)
    plot2D.TrajectorySet(platelets.trajectories,MesenteriumSubset)

[Package flowcatchR version 1.22.0 Index]