plot_ora_single {fcoex} | R Documentation

## ORA visualization for one module

### Description

This function was copied and adapted from the CEMiTool package. The visualization in this function is derivative of the intelectual work of CEMiTool's authors.

### Usage

    plot_ora_single(
      es,
      ordr_by = "p.adjust",
      max_length = 50,
      pv_cut = 0.05,
      graph_color = "#4169E1",
      title = "Over Representation Analysis"
    )

### Arguments

`es` | a data.frame from ora function containing only one module
`ordr_by` | column to order the data.frame
`max_length` | max length of a gene set name
`pv_cut` | p-value cuttoff
`graph_color` | color of bars
`title` | title of the graph

### Value

a list with ggplot2 object and the number of significant gene sets

[Package fcoex version 1.2.0 Index]