statistic-methods {cpvSNP} | R Documentation

## ~~ Methods for Function `statistic` ~~

### Description

This function returns the calculated statistic for a specified `GeneSet` or a list of calculated statistics for a `GeneSetCollection`.

### Usage

    statistic(object)

### Arguments

`object` | An object of type `GeneSetResult`, `VEGASResult`, `GLOSSIResult`, `GeneSetResultCollection`, `VEGASResultCollection` or `GLOSSIResultCollection`

### Methods

Defined methods include:

`signature(object = "GeneSetResult")`

  Returns the calculated statistic for a specified `GeneSetResult` object

`signature(object = "GeneSetResultCollection")`

  Returns a list of calculated statistics for a `GeneSetResultCollection` object (1 for each set)

`signature(object = "VEGASResult")`

  Returns the calculated statistic for a specified `VEGASResult` object

`signature(object = "VEGASResultCollection")`

  Returns a list of calculated statistics for a `VEGASResultCollection` object (1 for each set)

`signature(object = "GLOSSIResult")`

  Returns the calculated statistic for a specified `GLOSSIResult` object

`signature(object = "GLOSSIResultCollection")`

  Returns a list of calculated statistics for a `GLOSSIResultCollection` object (1 for each set)

### Value

Returns decimal values or a list of decimal values corresponding to calculated statistics from a GLOSSI function call.

### Author(s)

Caitlin McHugh

### See Also

`GLOSSIResult`-class, `pValue`

### Examples

    	## Not run:
    	statistic( glossi(geneSet, assoc_table, ldMatrix) )

    ## End(Not run)

[Package cpvSNP version 1.20.0 Index]