2b2c9663a0cb7e7f7fdfd0de3e20df1a *DESCRIPTION
9f2ac2d2dd49d3d9bc3741a904441862 *INDEX
37f522ed78aa912c6d409c873531754d *Meta/Rd.rds
e00065855163c282e8adab2a116bf019 *Meta/features.rds
c5d6690f626f5c1907e65ded24f29c78 *Meta/hsearch.rds
b15b0c40fb3b3117c65266b59b4cbbca *Meta/links.rds
ff9000e3db7429d7aa32707902ea7aad *Meta/nsInfo.rds
05f740a0f1255e5e607c4768cd8df7c2 *Meta/package.rds
41ba7939fa75bc5dbba590d6dbd3238a *Meta/vignette.rds
7e3da990014f52ce3954dbd8a460f192 *NAMESPACE
dd6be23167e8b793ac67c79c001ad3e7 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/cobindR
e1e3ac286cb056e07e606857d8442d3e *R/cobindR.rdb
dffe98f8aaef25c1769897f328b4d155 *R/cobindR.rdx
ded51f71ec4570726e53717786f79c40 *doc/cobindR.R
496990aaee83d98ebd2a166ebf4593bc *doc/cobindR.Rnw
97a171e4e3e5e32140492820bba51b25 *doc/cobindR.pdf
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39be6d459717859da6cda86dcf79ceb1 *extdata/config_default.yml
11654be8f877d9f1dcf4050a7d6e2046 *extdata/example.fasta
2c46ba771fab025d9caa0c6f5d4ad8ba *extdata/pfms/myod.tfpfm
ee0c1768d0850b04bf7dd4279f23bfff *extdata/pfms/soxoctklf.tfpfm
96a7c45735d76974e4c96bd5ddd4d987 *extdata/sox_oct_example_vignette_seqs.fasta
043b0ae785ff9dd7f9ba9cc6e00866de *extdata/ucsc_example_ItemRGBDemo.bed
48119dc94fcce51bfedadd539ac00b8c *help/AnIndex
baf11a082f21ec05da0b649c3f5ab064 *help/aliases.rds
cdccaa5c37c5fd1b57a8ea83fcea1626 *help/cobindR.rdb
84b66dbc0cdd6c2742651eb0275c0d03 *help/cobindR.rdx
fe0acae1c5491fd033b21e0305adb4b8 *help/paths.rds
9469d10acaa07f031ebd90f5580baba3 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4a92f7d832d6ce402e8772d42fb1ec5c *html/SeqObj-class.html
0196dd881a49feede7c0685ee61a0186 *html/bg_binding_sites.html
dfa166eeffe15be4c9d7742c9b342eb5 *html/bg_pairs.html
1130f9e3c40a8a9a9d57ad97d3d3e91f *html/bg_sequence_origin.html
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a7bb2984c36dca3d7d6cbc649da2e9fb *html/bg_sequence_type.html
5431a2adcaa2819c9cdfc12b50dd277e *html/bg_sequences.html
86f4b0e90b245aaa7005ae206913bb1b *html/binding_sites.html
9155409e34c0e4aea7975cc89e470376 *html/cobindRConfiguration.html
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24806008c097ba5336e4f39fb960d220 *html/cobindr-internal.html
a6402f200d9a562b7884427469dc96fe *html/cobindr-package.html
078e3ec50bb04f7ea5ce093342021510 *html/comment.html
06cae8c7393916c481fca9526f9b0f91 *html/configuration-class.html
d09be7f7c0215137d3e47863a29398dc *html/configuration.html
c17ad3b7756ea226087e3b324315577f *html/downstream.html
0ac1e4df4b90a163a07d4a03ffb7e24d *html/experiment_description.html
0ef44550b0493ffce104d73a4cd6c001 *html/fdrThreshold.html
ff7dffbcb4500beab8f6a5e947876475 *html/find.pairs.html
e46cf7205eefe88b9054e7f1c4f7ce02 *html/get.bindingsite.ranges.html
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6ee25855250f7a3425dbc17e00f9ea87 *html/get.significant.pairs.html
36ae6c75893aa96c34c7f7eecbc39678 *html/id.html
25f4bd114c2ddb57d7d70ab18b3e7343 *html/location.html
bae403828f396746133049966310072c *html/mart.html
0d30d78d019a73ef2d8a10f53baae945 *html/max_distance.html
37684bd335769cf71e7a168b0b194d6e *html/name.html
c6d7ecd1b10cf8649c8ccb464045721a *html/pValue.html
390884e91a724c8d25bc9465369d5c54 *html/pairs.html
2266aa5564c070204ac0b0d838ef9520 *html/pairs_of_interest.html
586192fa4a9c28968a328368ce3d56eb *html/path.html
0ddfd1f3f94c6956764297f6c65bf6ae *html/pfm.html
1427dc065a3326816653d9199cf071ad *html/pfm_path.html
a63294e679b246bc51e02bff006a7221 *html/plot.detrending.html
5ee2388d1c7e308106e9e566c0950d9d *html/plot.gc.html
99c2815b60937956f15d54aca27537d5 *html/plot.pairdistance.html
7d16aacedc67d6a835e5d3fafa9d2853 *html/plot.pairdistribution.html
fcdff71ad674c20ece3523de34781879 *html/plot.positionprofile.html
93b917db9465bdf9bce48eb6924e446f *html/plot.positions.html
e49bd105c3953d3cce75ba1396e3bfb4 *html/plot.positions.simple.html
04e164fc9fe4ca356055c4311fe352b0 *html/plot.tfbs.heatmap.html
50bf0dc7b779c3782a4fc59af1f321b2 *html/plot.tfbs.venndiagram.html
33a62afd5f6e9820df82f2123e5fdfa8 *html/plot.tfbslogo.html
5b226577f493b0cdf79379db5bfad70a *html/predicted2pwm.html
559b9394afe0ba96ded04c7e4b283756 *html/pseudocount.html
e517919f0a6173922e0aca72d640fc31 *html/rtfbs.html
28233ae58bf822d14b85ddab212e38a7 *html/search.gadem.html
cc16e77d110087a574cd82c48cbb038b *html/search.pwm.html
aaf346b1f69cad245ab2e0893986eb90 *html/seqObj.html
cc44666dc9bf26f9e77506216259956b *html/sequence.html
0e6823e6e56f1d197d6d9a7fe8c8f02b *html/sequence_origin.html
d03bd8c0d544ba52b3f2b768a36d5ffa *html/sequence_source.html
be8753099958776f161b0c41c9ed7f4f *html/sequence_type.html
8780ab7cc57746473f18fe1f242a639d *html/sequences.html
771534a9235734244c9d0e6d62dd23bf *html/species.html
42c822fe8ada9ddbb037345c51d4d2f8 *html/testCpG.html
b7cf020e33ff21ff1f387778fcabdaed *html/threshold.html
78867190350d641ac058f322c3bb78b6 *html/uid.html
ea2e1fca28728271b0a7360cd98fe38e *html/upstream.html
388dfaf9005042ea7a3eacd6f646e68d *html/write.bindingsites.html
813573fa747472e311914c019c1ee546 *html/write.bindingsites.table.html
9ffbc0bda17c06bec0f483649208f684 *html/write.pairs.html
766b38df35113c3c2f795c994237b9e7 *html/write.sequences.html
b4211ebec6d576c6ab65ba3550d06864 *unitTests/runit-cobindR.R
c60cdccdabfc9bd25185e628114f7ae0 *unitTests/runit-configuration.R
