getGenProfs {canceR} | R Documentation

## Get Genetic Profile from selected Studies

### Description

Get Genetic Profile from selected Studies

### Usage

    getGenProfs()

### Value

dataframe with genetic profil

### Examples

    cgds<-CGDS("http://www.cbioportal.org/")
    # Get list of cancer studies at server
    Studies <- getCancerStudies(cgds)[,2]
    # Get available case lists (collection of samples) for a given cancer study
    mycancerstudy <- getCancerStudies(cgds)[2,1]
    mycaselist <- getCaseLists(cgds,mycancerstudy)[1,1]
    # Get available genetic profiles
    mygeneticprofile <- getGeneticProfiles(cgds,mycancerstudy)[4,1]
    ## Not run:
    getGenProfs()

    ## End(Not run)

[Package canceR version 1.22.01 Index]