gds2mlumi {bigmelon} | R Documentation

## Convert Genomic Data Structure file to Methylumiset or Methylset object.

### Description

Convert a Genomic Data Structure object back into a methylumi object, with subsetting features.

### Usage

    gds2mlumi(gds, i, j)
    gds2mset(gds, i, j, anno)

### Arguments

`gds` | a gds object
`i` | Index of rows
`j` | Index of Columns
`anno` | If NULL, function will attempt to guess the annotation to be used. Otherwise can be specified with either "27k", "450k", "epic" or "unknown".

### Value

A methylumi object

### Author(s)

Tyler Gorrie-Stone Who to contact: <t.gorrie-stone@qmul.ac.uk>

### Examples

    data(melon)
    e <- es2gds(melon, "melon.gds")
    gds2mlumi(e)
    closefn.gds(e)
    unlink("melon.gds")

[Package bigmelon version 1.14.0 Index]