AdductQuantif-class {adductomicsR} | R Documentation

## AdductQuantif class The AdductQuantif class contains a peak integral matrix, peak ranges and region of integration, the isotopic distribution identified for each integrated peak and the target table of peaks integrated.

### Description

AdductQuantif class The AdductQuantif class contains a peak integral matrix, peak ranges and region of integration, the isotopic distribution identified for each integrated peak and the target table of peaks integrated.

### Usage

    x

### Format

An object of class `NULL` of length 0.

### Value

peak integral matrix, peak ranges and region of integration, the isotopic distribution identified for each integrated peak and the target table of peaks integrated and their corresponding MS1 scan isotopic patterns

### Slots

`peakQuantTable`

  a matrix containing the peak integration results and consisting of a row for each peak identified in each sample (e.g 200 samples and 50 targets 200 * 50 = 10,000 rows)

`peakIdData`

  list of peak IDs

`predIsoDist`

  list of predicted Iso distances

`targTable`

  dataframe target table

`file.paths`

  character path to file

`Parameters`

  dataframe of specified parameters

### Methods

c

  `signature(object = "AdductQuantif")`: Concatenates the spectra information.

file.paths

  `signature(object = "AdductQuantif")`: Accesses the file paths.

peakQuantTable

  `signature(object = "AdductQuantif")`: Accesses the peak quantification data as a table.

peakIdData

  `signature(object = "AdductQuantif")`: Accesses the ID data for the peaks.

predIsoDist

  `signature(object = "AdductQuantif")`: Accesses the predicted isotopic distribution.

targTable

  `signature(object = "AdductQuantif")`: Accesses the user provided target table.

### Author(s)

JL Hayes jlhayes1982@gmail.com

[Package adductomicsR version 1.4.0 Index]