tronco.bootstrap {TRONCO} | R Documentation

## tronco bootstrap

### Description

Bootstrap a reconstructed progression model. For details and examples regarding the statistical assesment of an inferred model, we refer to the Vignette Section 7.

### Usage

    tronco.bootstrap(
      reconstruction,
      type = "non-parametric",
      nboot = 100,
      cores.ratio = 1,
      silent = FALSE
    )

### Arguments

`reconstruction` | The output of tronco.capri or tronco.caprese
`type` | Parameter to define the type of sampling to be performed, e.g., non-parametric for uniform sampling.
`nboot` | Number of bootstrap sampling to be performed when estimating the model confidence.
`cores.ratio` | Percentage of cores to use coresRate * (numCores - 1)
`silent` | A parameter to disable/enable verbose messages.

### Value

A TRONCO compliant object with reconstructed model

### Examples

    data(test_model)
    boot = tronco.bootstrap(test_model, nboot = 1)

[Package TRONCO version 2.20.1 Index]