pathway.visualization {TRONCO} | R Documentation

## pathway.visualization

### Description

Visualise pathways informations

### Usage

    pathway.visualization(
      x,
      title = paste("Pathways:", paste(names(pathways), collapse = ", ", sep = "")),
      file = NA,
      pathways.color = "Set2",
      aggregate.pathways,
      pathways,
      ...
    )

### Arguments

`x` | A TRONCO complian dataset
`title` | Plot title
`file` | To generate a PDF a filename have to be given
`pathways.color` | A RColorBrewer color palette
`aggregate.pathways` | Boolean parameter
`pathways` | Pathways
`...` | Additional parameters

### Value

plot information

[Package TRONCO version 2.20.1 Index]